Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq323 91.5 3e-13 >seq323 Length=666680 Score = 91.5 bits (100), Expect = 3e-13 Identities = 175/258 (68%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 94785 GCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACC 94844 ||| | ||| || |||| |||||||||| || || ||| || || ||||| ||||| Sbjct 306691 GCCAATTCCACCGGCAGACTTGGAGATGGAAGCGCACTGCTTCAGGGTGTCATAGATACC 306750 Query 94845 CTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGT 94904 ||||||||| ||||| || | ||| |||||||| ||||| | || || | || Sbjct 306751 CTCAATGCTGTCATCCTGCAACTTCAGCAGGAAGCAGGAGGACATCTGTGGCTTCGGAGT 306810 Query 94905 TCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964 ||| ||| || || || || | |||||||| || | | || |||||| | ||||| Sbjct 306811 CCCAGCATTGAAGAGAGTCGGCGTCGCATGGGTGAAGAACTTCCGCGACATCAAGTCATA 306870 Query 94965 TGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCAT 95024 || || | | | || || ||| |||||| ||| || | ||||| ||||| Sbjct 306871 CGTCTCCAGTGCGGCTTCGAGGTCCCCCATGTGAATTCCGCAGGCGGCGCGCATGATCAT 306930 Query 95025 GTCCTGAGGGCGCTCAAC 95042 || ||| || | ||| || Sbjct 306931 GTGCTGTGGCCTCTCCAC 306948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989461165412040