Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq155 107 2e-18 >seq155 Length=966944 Score = 107 bits (118), Expect = 2e-18 Identities = 248/374 (66%), Gaps = 0/374 (0%) Strand=Plus/Minus Query 63492 CCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATT 63551 |||||||| ||| ||||||| ||||||||||| || || || || | || ||| Sbjct 375876 CCATTGGTGCCGCGGATATAGGAGCCACTGGCACGGATGTTGGAAACTGCCACGCCGATT 375817 Query 63552 CCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATG 63611 || || || || ||||| | || ||| | |||| ||| || ||||| || || ||| Sbjct 375816 CCGCCGGCAGACTTGGAGATCAGAGCACATTGCTTTAGCGTATCGTAGATTCCCTCGATG 375757 Query 63612 CTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCA 63671 || || | ||| || || | ||||| ||||| ||| | | ||| |||||| Sbjct 375756 CTGTCTCCCTGCATTTTCAGCAAGAAACACGACGACATCTGGGGTGCCGGAGTGCCCGCA 375697 Query 63672 TTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCA 63731 || || ||||| || | ||||| || || | || || | |||| ||| ||||| Sbjct 375696 TTGAACAAGGTCGGGGTTGCGTGTGTGAAGAACCTTCTCGACATGAGATCGTAGGTCTCC 375637 Query 63732 ATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGA 63791 | || | | | ||||| |||||| || || | ||||| | || |||||| Sbjct 375636 AGCGCAGCCTGGAGATCCCCGCAATGAATGCCACAGGCAGCCCGCATGATCAGGTGCTGT 375577 Query 63792 GGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAA 63851 || | || || || ||||||| | ||||| | |||||| || || | || || || Sbjct 375576 GGGCGCTCCACGATCTTGTTGTGGACTTTCAGAAGGTAGGACTTCTCGAGCGTCTTGAAG 375517 Query 63852 CCAAAATAGTTGTA 63865 ||||| |||| ||| Sbjct 375516 CCAAAGTAGTCGTA 375503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629741329088640