Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq155 118 1e-21 >seq155 Length=966944 Score = 118 bits (130), Expect = 1e-21 Identities = 253/376 (67%), Gaps = 4/376 (1%) Strand=Plus/Minus Query 66285 CCATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATT 66344 |||||||| ||| ||||||| ||||| ||||| || || || || | || ||| Sbjct 375876 CCATTGGTGCCGCGGATATAGGAGCCACTGGCACGGATGTTGGAAACTGCCACGCCGATT 375817 Query 66345 CCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATA 66404 || || || || ||||| | || ||| | |||| |||||| ||||| ||||| || Sbjct 375816 CCGCCGGCAGACTTGGAGATCAGAGCACATTGCTTTAGCGTATCGTAGATTCCCTCGATG 375757 Query 66405 CTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGG--TGACGACTAGTTCCCG 66462 || || || ||| || || | ||||| ||||| ||| || || ||| |||| Sbjct 375756 CTGTCTCCCTGCATTTTCAGCAAGAAACACGACGACATCTGGGGTGCCGG--AGTGCCCG 375699 Query 66463 CATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCT 66522 |||| || ||||| || | ||||| || || | || || | |||| ||| |||| Sbjct 375698 CATTGAACAAGGTCGGGGTTGCGTGTGTGAAGAACCTTCTCGACATGAGATCGTAGGTCT 375639 Query 66523 CAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCT 66582 | | || | | | ||||| |||||| || || | ||||| | || ||||| Sbjct 375638 CCAGCGCAGCCTGGAGATCCCCGCAATGAATGCCACAGGCAGCCCGCATGATCAGGTGCT 375579 Query 66583 GAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAA 66642 | || | || ||||||||||||| | ||||| | |||||| || || | || || | Sbjct 375578 GTGGGCGCTCCACGATCTTGTTGTGGACTTTCAGAAGGTAGGACTTCTCGAGCGTCTTGA 375519 Query 66643 AACCAAAATAGTTGTA 66658 | ||||| |||| ||| Sbjct 375518 AGCCAAAGTAGTCGTA 375503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658093095273920