Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq155 118 2e-21 >seq155 Length=966944 Score = 118 bits (130), Expect = 2e-21 Identities = 253/376 (67%), Gaps = 4/376 (1%) Strand=Plus/Minus Query 80164 CCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATT 80223 |||||||| ||| ||||||| ||||||||||| || || || || | || ||| Sbjct 375876 CCATTGGTGCCGCGGATATAGGAGCCACTGGCACGGATGTTGGAAACTGCCACGCCGATT 375817 Query 80224 CCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATG 80283 || || || || ||||| | || ||| | |||| |||||| ||||| ||||| ||| Sbjct 375816 CCGCCGGCAGACTTGGAGATCAGAGCACATTGCTTTAGCGTATCGTAGATTCCCTCGATG 375757 Query 80284 CTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGG--TGACGACTAGTTCCCG 80341 || || | ||| || || | ||||| ||||| ||| || || ||| |||| Sbjct 375756 CTGTCTCCCTGCATTTTCAGCAAGAAACACGACGACATCTGGGGTGCCGG--AGTGCCCG 375699 Query 80342 CATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCT 80401 |||| || ||||| || | ||||| || || | || |||| |||| ||| |||| Sbjct 375698 CATTGAACAAGGTCGGGGTTGCGTGTGTGAAGAACCTTCTCGACATGAGATCGTAGGTCT 375639 Query 80402 CAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCT 80461 | | || | | | ||||| |||||| || || | ||||| | || ||||| Sbjct 375638 CCAGCGCAGCCTGGAGATCCCCGCAATGAATGCCACAGGCAGCCCGCATGATCAGGTGCT 375579 Query 80462 GAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAA 80521 | || | || ||||||||||| | | ||||| | ||| || || || | || || | Sbjct 375578 GTGGGCGCTCCACGATCTTGTTGTGGACTTTCAGAAGGTAGGACTTCTCGAGCGTCTTGA 375519 Query 80522 AACCAAAATAGTTGTA 80537 | ||||| |||| ||| Sbjct 375518 AGCCAAAGTAGTCGTA 375503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718181817648320