Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq155 118 1e-21 >seq155 Length=966944 Score = 118 bits (130), Expect = 1e-21 Identities = 253/376 (67%), Gaps = 4/376 (1%) Strand=Plus/Minus Query 72247 CCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATT 72306 |||||||| ||| ||||||| ||||||||||| || ||| || || | || ||| Sbjct 375876 CCATTGGTGCCGCGGATATAGGAGCCACTGGCACGGATGTTGGAAACTGCCACGCCGATT 375817 Query 72307 CCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATA 72366 || || || || ||||| | || ||| | |||| |||||| ||||| ||||| || Sbjct 375816 CCGCCGGCAGACTTGGAGATCAGAGCACATTGCTTTAGCGTATCGTAGATTCCCTCGATG 375757 Query 72367 CTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTT--GGTGACGACTAGTTCCCG 72424 || || || ||| || || | ||||| ||||| | |||| || ||| |||| Sbjct 375756 CTGTCTCCCTGCATTTTCAGCAAGAAACACGACGACATCTGGGGTGCCG--GAGTGCCCG 375699 Query 72425 CATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCT 72484 |||| || ||||| || | ||||| || || | || |||| |||| ||| |||| Sbjct 375698 CATTGAACAAGGTCGGGGTTGCGTGTGTGAAGAACCTTCTCGACATGAGATCGTAGGTCT 375639 Query 72485 CAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCT 72544 | | || | | | ||||| ||| || || || | ||||| | || |||| Sbjct 375638 CCAGCGCAGCCTGGAGATCCCCGCAATGAATGCCACAGGCAGCCCGCATGATCAGGTGCT 375579 Query 72545 GAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAA 72604 | || | || ||||||||||| | | ||||| | |||||| || || | || || | Sbjct 375578 GTGGGCGCTCCACGATCTTGTTGTGGACTTTCAGAAGGTAGGACTTCTCGAGCGTCTTGA 375519 Query 72605 AACCAAAATAGTTGTA 72620 | ||||| |||| ||| Sbjct 375518 AGCCAAAGTAGTCGTA 375503 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671057925042880