Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_004775.1 Length=39671 Score E Sequences producing significant alignments: (Bits) Value seq5535 340 5e-89 >seq5535 Length=1768 Score = 340 bits (376), Expect = 5e-89 Identities = 404/548 (74%), Gaps = 0/548 (0%) Strand=Plus/Plus Query 25560 GCAGCACGCTGGTATCCACATATCACTGCAGCCATGAATGAATTTGGCATTACCAAGCCA 25619 || || ||||||| || | ||| || || ||||| || || ||||| |||||||| Sbjct 781 GCTGCGCGCTGGTTTCAGCCAGTCAGTGACGCAATGAAAGAGTTCGGCATCACCAAGCCG 840 Query 25620 GATGACCAGGCGATGTTTATCGCACAGGTCGGGCATGAGTCAGGAGGATTTACCCGGCTA 25679 | |||||||||||||| ||||| |||| |||||||| |||| || || || | ||| Sbjct 841 GTAGACCAGGCGATGTTCATCGCTCAGGCAGGGCATGAATCAGCTGGCTTCACTCTGCTC 900 Query 25680 CAGGAAAACTTCAACTACAGCGTTAACGGGCTGTCCGGGTTTATCCGTGCCGGGCGAATC 25739 ||||| ||||||||| || || || ||| || |||||||| || || || Sbjct 901 GTGGAAAGCTTCAACTATCGCATTGCTGGACTGGTTAACTTCATCCGTGCTGGACGCCTC 960 Query 25740 ACTCCAGACCAGGCCAACGCACTCGGCAGGAAAACATATGAGAAGTCTCTTCCTCTGGAG 25799 ||| |||||||||| ||||| || || | | | ||| | | || | ||| Sbjct 961 ACTGCAGACCAGGCTAACGCGCTTGGGCGTCGTCCTGAAGAGCGAACATTACCGATTGAG 1020 Query 25800 CGTCAGCGTGCAATTGCCAATCTGGTGTACAGCAAGCGCATGGGAAATAACGGACCGGGC 25859 || ||||| || ||||| || ||||| |||||||| |||||||| || |||| ||| || Sbjct 1021 CGCCAGCGCGCCATTGCGAACCTGGTATACAGCAAACGCATGGGGAACAACGCACCCGGT 1080 Query 25860 GACGGATGGAATTATCGCGGTCGTGGACTTATTCAGATCACCGGCCTGAATAACTACCGC 25919 ||||| ||| ||| || || ||||| ||||| ||||| |||||||| ||||||||||| Sbjct 1081 GACGGCTGGTTTTACCGTGGGCGTGGGCTTATCCAGATTACCGGCCTCAATAACTACCGT 1140 Query 25920 GACTGTGGCAACGGCCTGAAGGTGGATCTGGTTCAGAATCCTGAACTGCTGGCGCAGGAC 25979 || ||||| |||||||||||||| |||||||| || | ||||| || | || | ||| Sbjct 1141 GATTGTGGGAACGGCCTGAAGGTTGATCTGGTAAAGCAGCCTGAGCTATTAGCCGAAGAC 1200 Query 25980 GAATACGCGGCCCGCAGCGCGGCGTGGTTCTTCGCAACCAAAGGCTGCATGAAGTACACC 26039 | ||||| ||| | |||||||||||||||||||| || || || ||| ||||||| || Sbjct 1201 GTTTACGCAGCCAGAAGCGCGGCGTGGTTCTTCGCCACTAAGGGATGCCTGAAGTATTCC 1260 Query 26040 GGCGACCTGGTGCGCGTCACGCAGATCATAAATGGCGGGCAGAACGGTATCGACGACCGG 26099 ||||||||| ||| || ||| |||| || || ||||| |||||| | || || || Sbjct 1261 GGCGACCTGCTGCAGGTGACGAAGATTATCAACGGCGGAACGAACGGGCTTGAAGATCGT 1320 Query 26100 CGCGCGCG 26107 || || || Sbjct 1321 CGTGCTCG 1328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126811009348848