Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq342 113 1e-19 >seq342 Length=642287 Score = 113 bits (124), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| ||||| || || || || || || || | ||||| ||||| || || || Sbjct 509345 GTCGATTCCTTCTGGATGTTGTAATCCGAAAGGGTACGGCCGTCCTCTAGCTGCTTGCCC 509404 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | ||| || || || || || ||||| || ||||||||||| || || Sbjct 509405 GCGAAGATCAGTCGCTGCTGGTCGGGTGGGATGCCTTCCTTGTCCTGAATCTTAGCCTTG 509464 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| |||| ||| ||||| | || || || | || || ||||| || || | || Sbjct 509465 ACATTGTCTATGGTGTCGCTGGCCTCAACATCCAAGGTGATTGTCTTGCCCGTCAAGGTC 509524 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 509525 TTGACAAAGATCTGCAT 509541 Score = 86.0 bits (94), Expect = 1e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| ||||| || || || || || || || | ||||| || || || || ||| Sbjct 493862 GTGGATTCCTTCTGGATGTTGTAATCCGAAAGGGTACGCCCGTCCTCCAGCTGCTTGCCA 493921 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| || | ||| || || || || || ||||| |||||||||||||| ||||| Sbjct 493922 GCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCTTCCTTATCCTGAATCTTAGCTTTG 493981 Query 104483 ACATT 104487 || || Sbjct 493982 ACCTT 493986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151255479795104