Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017
-01-06] 9,688 sequences; 808,226,712 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq342 113 1e-19
>seq342
Length=642287
Score = 113 bits (124), Expect = 1e-19
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| ||||| || || || || || || || | ||||| ||||| || || ||
Sbjct 509345 GTCGATTCCTTCTGGATGTTGTAATCCGAAAGGGTACGGCCGTCCTCTAGCTGCTTGCCC 509404
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| || || || | ||| || || || || || ||||| || ||||||||||| || ||
Sbjct 509405 GCGAAGATCAGTCGCTGCTGGTCGGGTGGGATGCCTTCCTTGTCCTGAATCTTAGCCTTG 509464
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| |||| ||| ||||| | || || || | || || ||||| || || | ||
Sbjct 509465 ACATTGTCTATGGTGTCGCTGGCCTCAACATCCAAGGTGATTGTCTTGCCCGTCAAGGTC 509524
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 509525 TTGACAAAGATCTGCAT 509541
Score = 86.0 bits (94), Expect = 1e-11
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| ||||| || || || || || || || | ||||| || || || || |||
Sbjct 493862 GTGGATTCCTTCTGGATGTTGTAATCCGAAAGGGTACGCCCGTCCTCCAGCTGCTTGCCA 493921
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| ||||| || | ||| || || || || || ||||| |||||||||||||| |||||
Sbjct 493922 GCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCTTCCTTATCCTGAATCTTAGCTTTG 493981
Query 104483 ACATT 104487
|| ||
Sbjct 493982 ACCTT 493986
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151255479795104
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |