Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_005856.1 Length=94800 Score E Sequences producing significant alignments: (Bits) Value seq2600 123 2e-23 >seq2600 Length=11323 Score = 123 bits (136), Expect = 2e-23 Identities = 238/348 (68%), Gaps = 10/348 (3%) Strand=Plus/Plus Query 21052 TGGCACAACGCGGTGTAAACAAAGTCATCCTGATTGGTACCCTGGGGCAAGACCCGGAGA 21111 |||||||||| ||||| |||||||||||| | | || | || || ||||| || || Sbjct 1444 TGGCACAACGTGGTGTTAACAAAGTCATCATTGTCGGGAATCTCGGCCAAGATCCCGAAC 1503 Query 21112 TCAGGTATATACCAAATGGCGGCGCGGTCG-GAAGA-CTCAGCATCGCAACGAATGAATC 21169 || | || | |||||| ||| | || | || | ||| |||||||| |||| | Sbjct 1504 TCCGTGCAATGCAAAATGGTGGCTCTGTAGCCAATATTTCA--ATCGCAACATCTGAAAC 1561 Query 21170 ATGGCGCGACAAGCAAACGGGCCAACAGAAAGAGCAAACAGAATGGCATAAAGTCGTTTT 21229 ||||| |||||||| ||||| | || ||| ||||||| |||||| || ||||| Sbjct 1562 CTGGCGTGACAAGCAGACGGGTGAGCAACGAGAAAAAACAGAGTGGCATCGCGTTGTTTT 1621 Query 21230 GTTCGGAAAACTTGCTGAAATTGCGAGTGAGTATTTACGAAAAGGTTCTCAGGTCTACAT 21289 || |||||| | || || ||| ||||||| | | ||||| || || | || || Sbjct 1622 CTTTGGAAAATTAGCCGATGTTGTTGGTGAGTACCTGCACAAAGGCTCGCAAATATATAT 1681 Query 21290 CGAAGGGAAACTTAAAACCCGTAAGTGGACAGATGACGCCGGTGTAGAACGTTACACGAC 21349 |||||| ||||| || ||||||||| ||| | ||| || || |||||||| Sbjct 1682 CGAAGGACAACTTTCCACGCGTAAGTGGCAAGACCAAAGCGGCACGGATCGCTACACGAC 1741 Query 21350 GGAAATTATCGTCAGCCAG------GGCGGCACCATGCAAATGATCGG 21391 || || | |||| | | || ||||| ||||||||| |||| Sbjct 1742 TGAGATCGTAGTCAATCCGGCTTCTGGTGGCACTATGCAAATGCTCGG 1789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 303199396261848