Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq747 147 3e-30 seq1829 82.4 1e-10 >seq747 Length=368976 Score = 147 bits (162), Expect = 3e-30 Identities = 220/310 (71%), Gaps = 2/310 (1%) Strand=Plus/Plus Query 138438 GGTGGTGCTCTGCTCTGTGCTATTCATGGTGCTACAGTAGAAAATACTTTGTATGAAGAT 138497 || || ||||| || | ||||| ||||||||||| || || ||| | ||| ||||| Sbjct 84014 GGAGGAGCTCTACTATCAGCTATCCATGGTGCTACTGTCATTAACACTCTTTATCAAGAT 84073 Query 138498 GG-CGAACAATCAAATACTTTTAAAGCATTTGAACCTACTCAAGAAGAAGAAACCTATTC 138556 | || || | | ||||||| || || ||| | ||| ||||||||| ||||| Sbjct 84074 GCTCGTGCA-TATACTACTTTTCGTGCTTTCTCACCAAGTCAGCCAGAAGAAACTTATTC 84132 Query 138557 AATGGTTACTGCTAACCGTTACTGGTCGCAAATCTTTGGAATTGCTTTTAGTAATAAGCG 138616 |||| |||| ||||| |||| |||||| ||||| ||||| | ||||| |||||| | Sbjct 84133 AATGCTTACAGCTAATCGTTTCTGGTCTCAAATATTTGGTGTAGCTTTCTCAAATAAGAG 84192 Query 138617 TTGGCTTCACTTCTTTATGCTCTTTGTTCCCGTCATGGGTCTCTGGACTAGTAGTATTGG 138676 |||||||| ||||| ||||| ||||| || | ||| | ||| | | ||||| Sbjct 84193 ATGGCTTCATTTCTTCATGCTATTTGTACCTCTAGGAGGTATGTGGGCATCTTCAATTGG 84252 Query 138677 TATTATTGGTCTTGCTCTTAACCTACGAGCGTATGATTTCGTATCGCAAGAAATTCGTGC 138736 ||| ||||| | || |||| || |||| |||||||| | || |||||| | || Sbjct 84253 TATCATTGGATTAGCATTTAATTTAAGAGCTTATGATTTTATTTCTCAAGAATTGAAAGC 84312 Query 138737 AGCAGAAGAT 138746 |||||||||| Sbjct 84313 AGCAGAAGAT 84322 >seq1829 Length=69660 Score = 82.4 bits (90), Expect = 1e-10 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 138735 GCAGCAGAAGATCCTGAATTCGAGACCTTCTACACCAAGAACATTCTTCTGAATGAAGGT 138794 |||||||||||||||||||| || || ||||| || ||||||||||| || ||||||||| Sbjct 44152 GCAGCAGAAGATCCTGAATTTGAAACATTCTATACAAAGAACATTCTACTCAATGAAGGT 44093 Query 138795 CTGCGTGCCTGGATGGCT 138812 | || ||||||||| Sbjct 44092 ATACGACTTTGGATGGCT 44075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627891953075200