Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq662 95.1 1e-14 >seq662 Length=408752 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | || || || ||||||| | || || ||||||| | Sbjct 148795 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACGATTACGTTGGATGTTGAGGCCAGC 148854 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| |||||||| ||||| || || Sbjct 148855 GACACCATCGATAATGTCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCTCCGGACCAG 148914 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | |||| | || |||||||| | || || | || | | |||||||||| Sbjct 148915 CAGCGCTTGATCTTCGCTGGCAAGCAGTTGGAGGACGGAAGGACACTTTCCGATTATAAC 148974 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || || ||||| || |||| || ||| | | ||| |||| || Sbjct 148975 ATCCAGAAGGAATCCACCCTTCACTTGGTGCTGCGTTTGCGAGGTGG 149021 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | || || || ||||||| | || || ||||||| | Sbjct 147883 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACGATTACGTTGGATGTTGAGGCCAGC 147942 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| |||||||| ||||| || || Sbjct 147943 GACACCATCGATAATGTCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCTCCGGACCAG 148002 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | |||| | || |||||||| | || || | || | | ||| || ||| Sbjct 148003 CAGCGCTTGATCTTCGCTGGCAAGCAGTTGGAGGACGGAAGGACGCTTTCCGACTACAAC 148062 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 || || || ||||| ||| |||| || ||| Sbjct 148063 ATCCAGAAGGAATCCACACTTCACTTGGTG 148092 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | || || || ||||||| | || || ||||||| | Sbjct 148111 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACGATTACGTTGGATGTTGAGGCCAGC 148170 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| |||||||| ||||| || || Sbjct 148171 GACACCATCGATAATGTCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCTCCGGACCAG 148230 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | |||| | || |||||||| | || || | || | | ||| || ||| Sbjct 148231 CAGCGCTTGATCTTCGCTGGCAAGCAGTTGGAGGACGGAAGGACGCTTTCCGACTACAAC 148290 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 || || || ||||| ||| |||| || ||| Sbjct 148291 ATCCAGAAGGAATCCACACTTCACTTGGTG 148320 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | || || || ||||||| | || || ||||||| | Sbjct 148339 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACGATTACGTTGGATGTTGAGGCCAGC 148398 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| |||||||| ||||| || || Sbjct 148399 GACACCATCGATAATGTCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCTCCGGACCAG 148458 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | |||| | || |||||||| | || || | || | | ||| || ||| Sbjct 148459 CAGCGCTTGATCTTCGCTGGCAAGCAGTTGGAGGACGGAAGGACGCTTTCCGACTACAAC 148518 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 || || || ||||| ||| |||| || ||| Sbjct 148519 ATCCAGAAGGAATCCACACTTCACTTGGTG 148548 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || | || || || ||||||| | || || ||||||| | Sbjct 148567 ATGCAGATCTTCGTGAAGACCCTGACGGGCAAGACGATTACGTTGGATGTTGAGGCCAGC 148626 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| |||||||| ||||| || || Sbjct 148627 GACACCATCGATAATGTCAAGGCTAAGATCCAGGACAAGGAAGGCATCCCTCCGGACCAG 148686 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | |||| | || |||||||| | || || | || | | ||| || ||| Sbjct 148687 CAGCGCTTGATCTTCGCTGGCAAGCAGTTGGAGGACGGAAGGACGCTTTCCGACTACAAC 148746 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTG 24200 || || || ||||| ||| |||| || ||| Sbjct 148747 ATCCAGAAGGAATCCACACTTCACTTGGTG 148776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429885236381640