Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_007497.1 Length=44856 Score E Sequences producing significant alignments: (Bits) Value seq2600 96.9 1e-15 >seq2600 Length=11323 Score = 96.9 bits (106), Expect = 1e-15 Identities = 180/259 (69%), Gaps = 4/259 (2%) Strand=Plus/Minus Query 3483 TTCACGGCCACAAAGCGCACCGGGTATTGATCCGCCGCGACCTTCACCTTCACGCGCGCG 3542 |||||||||| ||| || | || || || || || || | ||| | ||| || | |||| Sbjct 10929 TTCACGGCCAGAAAACGGAAAGGATAGTGTTCTGCTGCAAGCTTTATCTTGACTCTCGCG 10870 Query 3543 TCGTCTTGCCAATGCCCCTTCACCTCGTGCGCCTCGAGCTGGCCGTTCGCGAGCATCACC 3602 || |||| ||||||||| ||||| || ||| |||| || | || | ||||| || Sbjct 10869 TCCTCTTCCCAATGCCCTTTCACTTCATGCACCTCCAGATCACCCGAGGTCAGCATGACG 10810 Query 3603 GTGAAATCGGGCGTGTAGAACGTGTTGTCGGCGAGACGGAACTTGATGCCCTCGAA-TCG 3661 || || | || || || |||||||| || || | ||||| ||||| | | Sbjct 10809 AAAAAGTCCGCTGTATACGTTGTTTTGTCGGCAAGGCGCAGTTTGATTGATTCGAACTTG 10750 Query 3662 ATACCAGACGATTTCGCCGGCCTGCTTCCGCGCCTCCAGATGGTCGGCGTAGCGCTGC-T 3720 | ||||| ||| ||| || || ||| | ||| | |||||| ||||||||||| ||| | Sbjct 10749 A-ACCAGGCGACTTCACCAGCATGCATACGCCATTTCAGATGTTCGGCGTAGCG-TGCTT 10692 Query 3721 CGGTCTTGTTCATCGCGCC 3739 | || || ||||| | ||| Sbjct 10691 CTGTTTTATTCATTGTGCC 10673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143401100522208