Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_007804.2 Length=39104 Score E Sequences producing significant alignments: (Bits) Value seq5535 302 1e-77 >seq5535 Length=1768 Score = 302 bits (334), Expect = 1e-77 Identities = 385/524 (73%), Gaps = 12/524 (2%) Strand=Plus/Plus Query 25579 GCGATGAAAGAGTTTGGTATCAGCAAAGCTGAAGATCAGGCAATGTTTATTGCTCAGGTC 25638 || ||||||||||| || |||| ||| | | ||| ||||| ||||| || ||||||| Sbjct 811 GCAATGAAAGAGTTCGGCATCACCAAGCCGGTAGACCAGGCGATGTTCATCGCTCAGGCA 870 Query 25639 GGGCATGAGTCTGGTGGTTTCATCCGGTTGCAGGAGAATTTCAACTACAGTGTCACCGGA 25698 |||||||| || | ||| |||| | | | ||| | |||||||| | | | ||| Sbjct 871 GGGCATGAATCAGCTGGCTTCACTCTGCTCGTGGAAAGCTTCAACTATCGCATTGCTGGA 930 Query 25699 CTGGCTAACTTCGTTCGGGCTGGGCGTCTCGCTCAGGGACAGGCCAACGC-ATTGG--GT 25755 |||| ||||||| | || ||||| || ||| || | ||||| ||||| |||| || Sbjct 931 CTGGTTAACTTCATCCGTGCTGGACGCCTCACTGCAGACCAGGCTAACGCGCTTGGGCGT 990 Query 25756 CGCCGCGCAG-GCGAACCTCCATTGCCACTCGAGCGCCAGAGAGCGATCGCCAATCTGGT 25814 || | | || ||||| |||| || | ||||||||| | || || || || ||||| Sbjct 991 CGTCCTGAAGAGCGAA----CATTACCGATTGAGCGCCAGCGCGCCATTGCGAACCTGGT 1046 Query 25815 GTACAGCAAACGCATGGGTAACAATGCTCCCGGCGATGGCTGGAATTACCGTGGGCGCGG 25874 ||||||||||||||||| ||||| || ||||| || |||||| |||||||||||| || Sbjct 1047 ATACAGCAAACGCATGGGGAACAACGCACCCGGTGACGGCTGGTTTTACCGTGGGCGTGG 1106 Query 25875 GCTTATCCAGATTACCGGTTTGAATAACTATCGTGATTGCGGAAACGGTCTGAAGGTTGA 25934 |||||||||||||||||| | |||||||| |||||||| || ||||| ||||||||||| Sbjct 1107 GCTTATCCAGATTACCGGCCTCAATAACTACCGTGATTGTGGGAACGGCCTGAAGGTTGA 1166 Query 25935 CCTGCTGGAGAGCCCTGAATTGCTGGCGCATGACGAATATGCGGCTCGTAGCGCAGCGTG 25994 ||| | || ||||| | | || | |||| || || || | ||||| ||||| Sbjct 1167 TCTGGTAAAGCAGCCTGAGCTATTAGCCGAAGACGTTTACGCAGCCAGAAGCGCGGCGTG 1226 Query 25995 GTTCTTTGCCAGCAAAGGATGCATGAAGTATACCGGCGA--TATTGCACGTGTAACTCTG 26052 |||||| |||| || |||||| |||||||| ||||||| | |||| ||| || | Sbjct 1227 GTTCTTCGCCACTAAGGGATGCCTGAAGTATTCCGGCGACCTGCTGCAGGTG--ACGAAG 1284 Query 26053 ATTATCAATGGTGGCCGGAACGGCATCGACGACCGGCGCGCGCG 26096 |||||||| || || |||||| | || || || || || || Sbjct 1285 ATTATCAACGGCGGAACGAACGGGCTTGAAGATCGTCGTGCTCG 1328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 124996818086496