Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq747 150 2e-31 >seq747 Length=368976 Score = 150 bits (166), Expect = 2e-31 Identities = 225/316 (71%), Gaps = 4/316 (1%) Strand=Plus/Plus Query 167871 TAGGCGGTGCATTGCTTTCTGCAATCCATGGTGTTACAGTAGAGAATACTCTGTATGAAG 167930 |||| || || | || || || |||||||||| ||| || || ||||| ||| ||| Sbjct 84012 TAGGAGGAGCTCTACTATCAGCTATCCATGGTGCTACTGTCATTAACACTCTTTATCAAG 84071 Query 167931 ATGGT-GAGCAAGCAAAC-ACTTTCAAAGCATTTGATACGACTCAGGAAGAGGAAACTTA 167988 ||| | | ||| | || ||||| || || | | |||| ||| |||||||| Sbjct 84072 ATGCTCGTGCAT--ATACTACTTTTCGTGCTTTCTCACCAAGTCAGCCAGAAGAAACTTA 84129 Query 167989 TTCCATGGTCACTGCTAACCGATTCTGGTCTCAAATTTTTGGTATTGCTTTCAGCAATAA 168048 ||| ||| | || ||||| || |||||||||||||| |||||| | |||||| ||||| Sbjct 84130 TTCAATGCTTACAGCTAATCGTTTCTGGTCTCAAATATTTGGTGTAGCTTTCTCAAATAA 84189 Query 168049 GCGTTGGTTGCACTTCTTTATGCTTTTCGTTCCTGTCATGGGACTTTGGACAAGTTCTAT 168108 | | ||| | || ||||| ||||| || || ||| | || | ||| || ||| || Sbjct 84190 GAGATGGCTTCATTTCTTCATGCTATTTGTACCTCTAGGAGGTATGTGGGCATCTTCAAT 84249 Query 168109 TGGTATCATCGGTCTCGCACTTAATCTTCGTGCTTATGACTTTGTGTCTCAGGAAGTTAG 168168 ||||||||| || | ||| ||||| | | |||||||| ||| | ||||| ||| | | Sbjct 84250 TGGTATCATTGGATTAGCATTTAATTTAAGAGCTTATGATTTTATTTCTCAAGAATTGAA 84309 Query 168169 AGCAGCAGAGGATCCA 168184 ||||||||| ||| || Sbjct 84310 AGCAGCAGAAGATACA 84325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567163308204800