Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_010495.1 Length=45051 Score E Sequences producing significant alignments: (Bits) Value seq2600 132 1e-26 >seq2600 Length=11323 Score = 132 bits (146), Expect = 1e-26 Identities = 214/304 (70%), Gaps = 8/304 (3%) Strand=Plus/Minus Query 32866 ACAATCTCAGTGGTGTATTTGTCCACGCCGCTGCTGTCAGTCCACTTACGAGTGCGAAGT 32925 || |||||||| ||||| ||| |||||| ||| ||||||||| ||| |||| Sbjct 1750 ACGATCTCAGTCGTGTAGCGATCCGTGCCGCTTTGGTCTTGCCACTTACGCGTGGAAAGT 1691 Query 32926 TGTCCTTCTATATAAACCTGCGACCCTTTACGAAGATACTCTCCTGCAACTTCCGCAATT 32985 |||||||| ||||| | ||||| ||||| | || ||||| || |||| || || | | Sbjct 1690 TGTCCTTCGATATATATTTGCGAGCCTTTGTGCAGGTACTCACCAACAACATCGGCTAAT 1631 Query 32986 TTTCCGAAGATAACAACTCGATGCCATTCAGTATGTTCTTTCTTTTCTCCTGTTTGCTTG 33045 ||||| |||| |||||| |||||||| || || | |||| | || || || |||||| Sbjct 1630 TTTCCAAAGAAAACAACGCGATGCCACTCTGTTTTTTCTCGTTGCTCACCCGTCTGCTTG 1571 Query 33046 TCTTTCCACTGCTCAGATGTTGCAACAGAAAGGTTCGCAATTGCAGAGCC-TGATGCTGA 33104 || ||| ||||||||||| | |||| || || | ||||||| || || Sbjct 1570 TCACGCCAGGTTTCAGATGTTGCGATTGAAATATTGGC---TACAGAGCCACCATTTTGC 1514 Query 33105 ATATTTA---ACTTCAGGGTCATTTCCGAGAGTGCCGACAATGATTACTTTATTTACGCC 33161 || | | | ||| || || | |||||| | ||||||||||| ||||| || || || Sbjct 1513 AT-TGCACGGAGTTCGGGATCTTGGCCGAGATTCCCGACAATGATGACTTTGTTAACACC 1455 Query 33162 GCGT 33165 ||| Sbjct 1454 ACGT 1451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144025028734128