Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq6891 84.2 2e-11 seq465 84.2 2e-11 seq662 82.4 7e-11 >seq6891 Length=1358 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||||| |||||| |||||| || ||| || || || | ||| || || Sbjct 591 GTGGACTCTTCTTGAATGTTGTAAGATGACAACGTCCGTCCGTCTTCCAACTGCTTCCCG 650 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TT 127035 ||| | ||||| || |||||||||||||| ||||| || |||| ||| | | ||| || Sbjct 651 GCGAAAATCAAGCGTTGCTGATCGGGAGGGATGCCTTCGCGGTCC-TGAATCTGTGCTTT 709 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | || | |||||||| | | ||| || || | | ||| ||||||||| || || || Sbjct 710 TAATTCGGCCACGGTGTCGCTTCCCTCTACGTCCAAGATCAGCGTTTTGCCCGTGAGTGT 769 Query 127096 TTTTACAAAAATCTG 127110 || || || || || Sbjct 770 CTTCACGAACATTTG 784 >seq465 Length=541741 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || ||||||| |||||| |||||| || ||| || || || | ||| || || Sbjct 164048 GTGGACTCTTCTTGAATGTTGTAAGATGACAACGTCCGTCCGTCTTCCAACTGCTTCCCG 163989 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TT 127035 ||| | ||||| || |||||||||||||| ||||| || |||| ||| | | ||| || Sbjct 163988 GCGAAAATCAAGCGTTGCTGATCGGGAGGGATGCCTTCGCGGTCC-TGAATCTGTGCTTT 163930 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | || | |||||||| | | ||| || || | | ||| ||||||||| || || || Sbjct 163929 TAATTCGGCCACGGTGTCGCTTCCCTCTACGTCCAAGATCAGCGTTTTGCCCGTGAGTGT 163870 Query 127096 TTTTACAAAAATCTG 127110 || || || || || Sbjct 163869 CTTCACGAACATTTG 163855 >seq662 Length=408752 Score = 82.4 bits (90), Expect = 7e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || || ||||||||||| || | || || || || || || ||||| ||| Sbjct 44606 CCACCTCGCAAGCGCAACACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAA 44547 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||| | || || | ||| || || ||| ||||||| |||||||| |||||||| Sbjct 44546 AGCGTCCTTCCGTCCTCCAACTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGG 44487 Query 127007 ATGCCCTCCTTGTCC 127021 || || ||||||||| Sbjct 44486 ATTCCTTCCTTGTCC 44472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475443216853120