Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq747 150 2e-31 >seq747 Length=368976 Score = 150 bits (166), Expect = 2e-31 Identities = 226/321 (70%), Gaps = 0/321 (0%) Strand=Plus/Minus Query 6391 TGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGGTTAAGTGC 6450 || ||| || |||||| | | ||||| |||| ||| ||||||||||| | |||| ||| Sbjct 84325 TGTATCTTCTGCTGCTTTCAATTCTTGAGAAATAAAATCATAAGCTCTTAAATTAAATGC 84266 Query 6451 AAGACCAATAATACCAATGCTAGAGGTCCAAAGACCCATAACAGGAACAAACAGCATAAA 6510 | ||||| |||||||| ||| | ||| | ||| | ||| ||||| ||||| || Sbjct 84265 TAATCCAATGATACCAATTGAAGATGCCCACATACCTCCTAGAGGTACAAATAGCATGAA 84206 Query 6511 GAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGACCAGAAACGATT 6570 |||||| ||||| | |||||| ||| || | |||||| || ||||||||||||||||| Sbjct 84205 GAAATGAAGCCATCTCTTATTTGAGAAAGCTACACCAAATATTTGAGACCAGAAACGATT 84146 Query 6571 AGCCGTGACCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCAAACGCCTTGAAAGTATT 6630 ||| || | ||| ||||| || || ||| || | || || || |||||| | Sbjct 84145 AGCTGTAAGCATTGAATAAGTTTCTTCTGGCTGACTTGGTGAGAAAGCACGAAAAGTAGT 84086 Query 6631 TGATTGTTCACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAATAGCACAGAG 6690 || | |||||| | | | ||| || ||||||||||| || ||||| | || Sbjct 84085 ATATGCACGAGCATCTTGATAAAGAGTGTTAATGACAGTAGCACCATGGATAGCTGATAG 84026 Query 6691 CAATGCTCCACCTAAGATACC 6711 | ||||| ||||| || || Sbjct 84025 TAGAGCTCCTCCTAATATTCC 84005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622049460686720