Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq747 134 2e-26 >seq747 Length=368976 Score = 134 bits (148), Expect = 2e-26 Identities = 152/204 (75%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 171227 AGAAGAAACTTACAGTATGATTACAGCAAACAGATTCTGGTCACAGATATTTGGTATTGC 171286 |||||||||||| ||| ||||||| || | |||||||| || ||||||||| | || Sbjct 84118 AGAAGAAACTTATTCAATGCTTACAGCTAATCGTTTCTGGTCTCAAATATTTGGTGTAGC 84177 Query 171287 TTTCTCTAACAAAAGATTTTTACACTTCCTTATGTTGTTCGTTCCTGTCATGGGTATGTG 171346 |||||| || || |||| | || ||| | ||| | || || ||| | |||||||| Sbjct 84178 TTTCTCAAATAAGAGATGGCTTCATTTCTTCATGCTATTTGTACCTCTAGGAGGTATGTG 84237 Query 171347 GACATCATCTATAGGTATCGTAGGTCTAGCACTTAACCTCAGAGCATACGATTTTGTATC 171406 | |||| || || |||||| | || ||||| |||| | ||||| || |||||| | || Sbjct 84238 GGCATCTTCAATTGGTATCATTGGATTAGCATTTAATTTAAGAGCTTATGATTTTATTTC 84297 Query 171407 TCAAGAGATAAGAGCAGCAGAAGA 171430 |||||| | | |||||||||||| Sbjct 84298 TCAAGAATTGAAAGCAGCAGAAGA 84321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579142657329920