Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_015281.1 Length=179563 Score E Sequences producing significant alignments: (Bits) Value seq747 123 3e-23 >seq747 Length=368976 Score = 123 bits (136), Expect = 3e-23 Identities = 224/325 (69%), Gaps = 2/325 (1%) Strand=Plus/Plus Query 169871 GGAATCTTGGGCGGAGCATTGCTTTCTGCTATCCATGGTGTTACAGTAGAGAACACATTG 169930 ||||| || || ||||| | || || ||||||||||||| ||| || ||||| | Sbjct 84005 GGAATATTAGGAGGAGCTCTACTATCAGCTATCCATGGTGCTACTGTCATTAACACTCTT 84064 Query 169931 TATGAAGACGGT-GAGCAGGCAAATACTTTCAAGGCGTTTGATTCGACACAGGAAGAAGA 169989 ||| |||| | | | ||| | |||||| || || | | ||| |||||| Sbjct 84065 TATCAAGATGCTCGTGCATATAC-TACTTTTCGTGCTTTCTCACCAAGTCAGCCAGAAGA 84123 Query 169990 GACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCGTTTTC 170049 |||||||| ||| | || || || || |||||||| || || || ||| | || || || Sbjct 84124 AACTTATTCAATGCTTACAGCTAATCGTTTCTGGTCTCAAATATTTGGTGTAGCTTTCTC 84183 Query 170050 TAACAAGCGTTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTTTGGACATC 170109 || ||| | ||||||||||| |||||| | ||||| ||| | ||| | ||| |||| Sbjct 84184 AAATAAGAGATGGCTTCATTTCTTCATGCTATTTGTACCTCTAGGAGGTATGTGGGCATC 84243 Query 170110 CTCTATTGGCATTATTGGCCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAGGA 170169 || ||||| || ||||| | || | ||| | | ||||| ||||| | ||| || Sbjct 84244 TTCAATTGGTATCATTGGATTAGCATTTAATTTAAGAGCTTATGATTTTATTTCTCAAGA 84303 Query 170170 GATCAGAGCAGCAGAAGATCCAGAA 170194 | | ||||||||||||| || || Sbjct 84304 ATTGAAAGCAGCAGAAGATACATAA 84328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 574404031247040