Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_015282.1 Length=174079 Score E Sequences producing significant alignments: (Bits) Value seq747 134 2e-26 >seq747 Length=368976 Score = 134 bits (148), Expect = 2e-26 Identities = 212/300 (71%), Gaps = 8/300 (3%) Strand=Plus/Plus Query 165779 CTTTCTGCCATCCATGGTGTTACAGTAGAGAATACTCTGTATCAAGATGGTGACGATGCA 165838 || || || |||||||||| ||| || || ||||| |||||||||| | || |||| Sbjct 84026 CTATCAGCTATCCATGGTGCTACTGTCATTAACACTCTTTATCAAGATGCT--CG-TGCA 84082 Query 165839 AATACT----TTCAAGGCATTTGACTCTACTCAAGAGGAAGAAACCTACTCAATGGTTAC 165894 ||||| ||| | | | || | | ||| |||||||| || |||||| |||| Sbjct 84083 TATACTACTTTTCGTGCTTTCTCAC-CAAGTCAGCCAGAAGAAACTTATTCAATGCTTAC 84141 Query 165895 TGCAAACCGTTTCTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAAGAGGTGGTTGCA 165954 || || |||||||||||||| || || ||| | || || |||||||| ||| | || Sbjct 84142 AGCTAATCGTTTCTGGTCTCAAATATTTGGTGTAGCTTTCTCAAATAAGAGATGGCTTCA 84201 Query 165955 TTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATTGG 166014 |||||| ||||| ||||| ||| | ||| | ||| || ||| || ||||| ||||| Sbjct 84202 TTTCTTCATGCTATTTGTACCTCTAGGAGGTATGTGGGCATCTTCAATTGGTATCATTGG 84261 Query 166015 TCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAGATCAGAGCAGCAGAAGA 166074 | || | || | | |||||||| ||| | || ||||| | | |||||||||||| Sbjct 84262 ATTAGCATTTAATTTAAGAGCTTATGATTTTATTTCTCAAGAATTGAAAGCAGCAGAAGA 84321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556857356406720