Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq747 156 5e-33 >seq747 Length=368976 Score = 156 bits (172), Expect = 5e-33 Identities = 232/325 (71%), Gaps = 8/325 (2%) Strand=Plus/Plus Query 169047 GGTATTTTGGGAGGAGCCTTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATACTCTG 169106 || || || |||||||| | || || || || ||||||| ||| || || ||||| Sbjct 84005 GGAATATTAGGAGGAGCTCTACTATCAGCTATCCATGGTGCTACTGTCATTAACACTCTT 84064 Query 169107 TATCAAGATGGTGAACAAGCAAATACT---TTCAAAGCATTTGACAGCAC-TCAGGAAGA 169162 |||||||||| | | ||| ||||| || || ||| || || |||| ||| Sbjct 84065 TATCAAGATGCT---CGTGCATATACTACTTTTCGTGC-TTTCTCACCAAGTCAGCCAGA 84120 Query 169163 GGAGACCTATTCAATGGTTACTGCAAACCGTTTCTGGTCTCAGATCTTTGGTATTGCGTT 169222 || || ||||||||| |||| || || |||||||||||||| || |||||| | || || Sbjct 84121 AGAAACTTATTCAATGCTTACAGCTAATCGTTTCTGGTCTCAAATATTTGGTGTAGCTTT 84180 Query 169223 CAGTAATAAGAGGTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTTTGGAC 169282 | |||||||| ||| | |||||||| ||||| ||||| ||| | ||| | ||| | Sbjct 84181 CTCAAATAAGAGATGGCTTCATTTCTTCATGCTATTTGTACCTCTAGGAGGTATGTGGGC 84240 Query 169283 AAGTTCCATCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCA 169342 | ||| || ||||| ||||| | || | || | | |||||||| ||| |||| || Sbjct 84241 ATCTTCAATTGGTATCATTGGATTAGCATTTAATTTAAGAGCTTATGATTTTATTTCTCA 84300 Query 169343 AGAGATCAGAGCAGCAGAAGATCCA 169367 ||| | | ||||||||||||| || Sbjct 84301 AGAATTGAAAGCAGCAGAAGATACA 84325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560540110371200