Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_017981.1 Length=49981 Score E Sequences producing significant alignments: (Bits) Value seq2600 134 4e-27 >seq2600 Length=11323 Score = 134 bits (148), Expect = 4e-27 Identities = 239/347 (69%), Gaps = 9/347 (3%) Strand=Plus/Minus Query 25945 CCGATCATCTGCATGGTTCCGCCAA----CG--TTGACCACAATTTCAGTGGTGTAGCGC 25998 |||| ||| ||||| || || ||| || ||||| || || ||||| |||||||| Sbjct 1789 CCGAGCATTTGCATAGTGCCACCAGAAGCCGGATTGACTACGATCTCAGTCGTGTAGCGA 1730 Query 25999 TCAACGCCG---TCCTTTTCCCACTTGCGGGTTTTCAGTTGCCCCTCAATGTAAACCTGT 26055 || |||| | | || |||||| || || ||||| || || || || | || Sbjct 1729 TCCGTGCCGCTTTGGTCTTGCCACTTACGCGTGGAAAGTTGTCCTTCGATATATATTTGC 1670 Query 26056 GAACCTTTCTTCAGGTACTCGCCCGCGATCTCCGCTACCTTGCCAAACAGCACGACGCGA 26115 || ||||| | ||||||||| || | | || |||| || ||||| | || |||||| Sbjct 1669 GAGCCTTTGTGCAGGTACTCACCAACAACATCGGCTAATTTTCCAAAGAAAACAACGCGA 1610 Query 26116 TGCCATTCTGTCACTTCTTTCTTTTCGCCGGTCTGCTTATCGTTCCAGCTTTCTGAGGTC 26175 ||||| ||||| |||| | || || |||||||| || |||| |||| || || Sbjct 1609 TGCCACTCTGTTTTTTCTCGTTGCTCACCCGTCTGCTTGTCACGCCAGGTTTCAGATGTT 1550 Query 26176 GCTACGGTAATGTTGGCGACTGCGCCGCCATTAGGCATGTAACGGATCTCTGGATCGTTC 26235 || | | ||| ||||| || | ||| ||||| |||| ||||| || ||||| | Sbjct 1549 GCGATTGAAATATTGGCTACAGAGCCACCATTTTGCATTGCACGGAGTTCGGGATCTTGG 1490 Query 26236 CCCAGGTTACCGACAAGGATTACTTTATTTACGCCGCGTGATGCCAT 26282 || || || ||||||| ||| ||||| || || || ||| |||||| Sbjct 1489 CCGAGATTCCCGACAATGATGACTTTGTTAACACCACGTTGTGCCAT 1443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159799213784208