Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_019516.1 Length=161440 Score E Sequences producing significant alignments: (Bits) Value seq747 158 1e-33 >seq747 Length=368976 Score = 158 bits (174), Expect = 1e-33 Identities = 229/320 (72%), Gaps = 4/320 (1%) Strand=Plus/Plus Query 10379 GGTATACTGGGAGGGGCGCTCCTATCAGCAATCCACGGAGTCACTGTAGAAAACACACTT 10438 || ||| | ||||| || || |||||||| ||||| || | ||||| ||||| ||| Sbjct 84005 GGAATATTAGGAGGAGCTCTACTATCAGCTATCCATGGTGCTACTGTCATTAACACTCTT 84064 Query 10439 TATCAAGATGG-CGAACAAGCAAAC-ACTTTCAAAGCTTTTGATAGCACTCAAGAAGAAG 10496 |||||||||| || || | || ||||| ||||| | ||| ||||| Sbjct 84065 TATCAAGATGCTCGTGCAT--ATACTACTTTTCGTGCTTTCTCACCAAGTCAGCCAGAAG 84122 Query 10497 AGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCCCAGATATTTGGAATTGCTTTTA 10556 | || ||||| ||| |||| ||||| ||||||||||| || |||||||| | ||||| Sbjct 84123 AAACTTATTCAATGCTTACAGCTAATCGTTTCTGGTCTCAAATATTTGGTGTAGCTTTCT 84182 Query 10557 GCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTACCTGTTATGGGTCTTTGGACCT 10616 ||||| | |||||||||||||| ||||| ||||||||| | ||| | ||| | | Sbjct 84183 CAAATAAGAGATGGCTTCATTTCTTCATGCTATTTGTACCTCTAGGAGGTATGTGGGCAT 84242 Query 10617 CTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTTGTATCTCAAG 10676 |||| ||||| |||||||| | || | ||| | | ||||| |||||| | ||||||| Sbjct 84243 CTTCAATTGGTATCATTGGATTAGCATTTAATTTAAGAGCTTATGATTTTATTTCTCAAG 84302 Query 10677 AGATCAGGGCGTCAGAAGAT 10696 | | | || |||||||| Sbjct 84303 AATTGAAAGCAGCAGAAGAT 84322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516417454272000