Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_020488.1 Length=38682 Score E Sequences producing significant alignments: (Bits) Value seq2600 95.1 3e-15 >seq2600 Length=11323 Score = 95.1 bits (104), Expect = 3e-15 Identities = 209/307 (68%), Gaps = 6/307 (2%) Strand=Plus/Minus Query 25783 GACAACAATCTCAGTAGTGTACTGATCT-TGAC-CTTGCTGGTTCTGCCACTTGCGCGTG 25840 ||| || |||||||| ||||| |||| || | ||| |||| |||||||| |||||| Sbjct 1754 GACTACGATCTCAGTCGTGTAGCGATCCGTGCCGCTT--TGGTCTTGCCACTTACGCGTG 1697 Query 25841 CGCAACTTG-CCTTCAATGTAAAGCTTTGAGCCTTTGCGTGTGTACTCGCCGGCCACCTC 25899 | || ||| ||||| || || | | ||||||||| | |||||| || | || || Sbjct 1696 -GAAAGTTGTCCTTCGATATATATTTGCGAGCCTTTGTGCAGGTACTCACCAACAACATC 1638 Query 25900 TGCCAACTTCCCGTATAACACAACACGGTGCCACTCTGTTTTTTCTACCGGCTGCCCTGT 25959 || || || || | || ||||| || |||||||||||||||||| ||| || || Sbjct 1637 GGCTAATTTTCCAAAGAAAACAACGCGATGCCACTCTGTTTTTTCTCGTTGCTCACCCGT 1578 Query 25960 CTGCTTGTCTTTGTACTGCTCACTGGTGGCAATGCTTAAATTTGCCACGGCGGTACCGTT 26019 ||||||||| | ||| || || || | ||| || || | | ||| || Sbjct 1577 CTGCTTGTCACGCCAGGTTTCAGATGTTGCGATTGAAATATTGGCTACAGAGCCACCATT 1518 Query 26020 AGGCATATACCTAACTTCCGGGTCCTGGCCTAAGTTGCCGACAATGATTACCTTGTTAAT 26079 |||| | | ||| || || ||||| | || ||||||||||| || ||||||| Sbjct 1517 TTGCATTGCACGGAGTTCGGGATCTTGGCCGAGATTCCCGACAATGATGACTTTGTTAAC 1458 Query 26080 TCCGCGT 26086 || ||| Sbjct 1457 ACCACGT 1451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123646573443264