Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_020837.1 Length=198013 Score E Sequences producing significant alignments: (Bits) Value seq747 161 1e-34 >seq747 Length=368976 Score = 161 bits (178), Expect = 1e-34 Identities = 223/312 (71%), Gaps = 0/312 (0%) Strand=Plus/Minus Query 101838 TGGATCTTCTGCTGCTCTGATCTCTTGGGATACAAAGTCATAAGCACGAAGGTTGAGAGC 101897 || ||||||||||||| | | ||||| || | ||| |||||||| | | || | || Sbjct 84325 TGTATCTTCTGCTGCTTTCAATTCTTGAGAAATAAAATCATAAGCTCTTAAATTAAATGC 84266 Query 101898 AAGACCAATAATACCGATGGAACTTGTCCACAGACCCATAACAGGAACAAAGAGCATAAA 101957 | ||||| ||||| || ||| || ||||| ||| | ||| ||||| ||||| || Sbjct 84265 TAATCCAATGATACCAATTGAAGATGCCCACATACCTCCTAGAGGTACAAATAGCATGAA 84206 Query 101958 GAAATGCAACCACCTCTTATTACTAAATGCAATACCAAAGATTTGAGACCAGAAACGGTT 102017 |||||| | ||| |||||||| || || | |||||| ||||||||||||||||| || Sbjct 84205 GAAATGAAGCCATCTCTTATTTGAGAAAGCTACACCAAATATTTGAGACCAGAAACGATT 84146 Query 102018 TGCTGTAACCATTGAATAAGTCTCTTCCTCTTGTGTGGAATCGAATGCTTTGAAAGTGTT 102077 ||||||| |||||||||||| ||||| || | | ||| || ||||| | Sbjct 84145 AGCTGTAAGCATTGAATAAGTTTCTTCTGGCTGACTTGGTGAGAAAGCACGAAAAGTAGT 84086 Query 102078 TGCTTGATCACCATCTTCATACAGAGTGTTCTCCACAGTGACACCGTGGATTGCTGACAG 102137 | | | |||||| ||| |||||||| ||||| |||| ||||| ||||| || Sbjct 84085 ATATGCACGAGCATCTTGATAAAGAGTGTTAATGACAGTAGCACCATGGATAGCTGATAG 84026 Query 102138 CAGTGCTCCTCC 102149 || |||||||| Sbjct 84025 TAGAGCTCCTCC 84014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633436881503040