Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq837 82.4 4e-11 >seq837 Length=329666 Score = 82.4 bits (90), Expect = 4e-11 Identities = 128/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 ||| || | ||| |||||||| | |||| || | ||| | || | | || || || Sbjct 86150 CATGAAGAGATCCGGAATCCAGAGCCCATAGAAGAGATCCCGGGCGCGCTGCTCCTCCTT 86091 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 ||||||||||| | || || || || || || | ||||| |||||| || || | || Sbjct 86090 GCCGTGATTCTTCCTCAGCTCCAACAAGTCGAAGACATCTGCGTGCCAAGGCTCCAGGTA 86031 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 || || ||| || || || ||||||||||| ||||| ||||| | || || || || Sbjct 86030 CATCGCGAAAGAGCCCTTCCTCTTTCCTCCACCCTGATCGACGTACCGCGCCGTCTCGTT 85971 Query 26113 GAA 26115 ||| Sbjct 85970 GAA 85968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253010122934600