Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq747 127 2e-24 >seq747 Length=368976 Score = 127 bits (140), Expect = 2e-24 Identities = 172/240 (72%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 123002 TCTTCTGCTGCTCTTATCTCTTGAGATACAAAGTCGTATGCTCTGAGGTTAAGTGCTAGA 123061 |||||||||||| | | |||||||| | ||| || || ||||| | |||| ||||| Sbjct 84321 TCTTCTGCTGCTTTCAATTCTTGAGAAATAAAATCATAAGCTCTTAAATTAAATGCTAAT 84262 Query 123062 CCTACGATACCTATAGATGATGTCCACATACCCATGACAGGAACGAACAACATAAGGAAG 123121 || | |||||| || || |||| ||||||||| | ||| || || | ||| | ||| Sbjct 84261 CCAATGATACCAATTGAAGATGCCCACATACCTCCTAGAGGTACAAATAGCATGAAGAAA 84202 Query 123122 TGTAAGAATCTTTTGTTAGAAAATGCGATACCAAATATCTGTGACCAGAATCTGTTCGCT 123181 || | |||| || || || || || | ||||||||| || |||||||| | || ||| Sbjct 84201 TGAAGCCATCTCTTATTTGAGAAAGCTACACCAAATATTTGAGACCAGAAACGATTAGCT 84142 Query 123182 GTAATCATACTATAAGTTTCTTCTTCCTGTGTAGGATCGAATGCTCTGAAAGTTGTAGAT 123241 |||| ||| ||||||||||||| ||| | || ||| || | ||||| ||| || Sbjct 84141 GTAAGCATTGAATAAGTTTCTTCTGGCTGACTTGGTGAGAAAGCACGAAAAGTAGTATAT 84082 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578928283293760