Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq747 127 3e-24 >seq747 Length=368976 Score = 127 bits (140), Expect = 3e-24 Identities = 211/301 (70%), Gaps = 4/301 (1%) Strand=Plus/Minus Query 23541 TCTTGACTCACAAAATCATAAGCACGAAGATTAAGAGCAAGCCCAATGATGCCAATAGAA 23600 |||||| | |||||||||||| | | ||||| || | |||||||| ||||| ||| Sbjct 84303 TCTTGAGAAATAAAATCATAAGCTCTTAAATTAAATGCTAATCCAATGATACCAATTGAA 84244 Query 23601 GAGACCCAAAGACCCATGACAGGAACAAACAACATAAAGAAGTGCAACCAACGCTTATTG 23660 || |||| | ||| | ||| ||||| | ||| ||||| || | ||| | |||||| Sbjct 84243 GATGCCCACATACCTCCTAGAGGTACAAATAGCATGAAGAAATGAAGCCATCTCTTATTT 84184 Query 23661 CTAAACGCAACCCCGAAGATTTGTGACCAAAAACGATTTGCTGTAACCATCGAATAGGTC 23720 || || || || || ||||| ||||| |||||||| ||||||| ||| ||||| || Sbjct 84183 GAGAAAGCTACACCAAATATTTGAGACCAGAAACGATTAGCTGTAAGCATTGAATAAGTT 84124 Query 23721 TCCTCCTCCTGAGTGGAATCGAACGCTTTAAAAGT-GTTTGCCTGTTC-TCCATCTTCAT 23778 || || |||| | | ||| || |||||| || | || | |||||| || Sbjct 84123 TCTTCTGGCTGACTTGGTGAGAAAGCACGAAAAGTAGTAT--ATGCACGAGCATCTTGAT 84066 Query 23779 ACAGTGTATTCTCGACAGTAACTCCATGAATAGCAGAGAGAAGTGCTCCTCCCAGTATAC 23838 | || || || ||||||| | ||||| ||||| || || || |||||||| | ||| | Sbjct 84065 AAAGAGTGTTAATGACAGTAGCACCATGGATAGCTGATAGTAGAGCTCCTCCTAATATTC 84006 Query 23839 C 23839 | Sbjct 84005 C 84005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665413808628160