Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_021190.1 Length=46150 Score E Sequences producing significant alignments: (Bits) Value seq5348 214 5e-51 >seq5348 Length=1880 Score = 214 bits (236), Expect = 5e-51 Identities = 211/273 (77%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 33312 TGATATGCTGaaaaaaaCATCAAAAAGGAGTGGGTAATGGACTTGGATGAAGAAAGAGTG 33371 || |||| | ||| |||||||| || || | ||||||| ||||| || ||||| ||| Sbjct 890 TGTTATGATTAAATAAACATCAGAAGGGGCGTGTTAATGGATTTGGACGATGAAAGGGTG 949 Query 33372 AACATGATGGTTCACGCCATGGGGCGGGCGGTCATGGAGTTGTCACTGGCAGATTTACCT 33431 | |||||| ||||| || ||||| ||||||| ||||| || || || ||||| ||| Sbjct 950 AGCATGATTGTTCATGCTATGGGCAGGGCGGTTATGGATTTATCGCTATCAGATCAACCA 1009 Query 33432 ATGACCCAGCAAAACATCATCGACAAGCTGGAACGGTACCGGAAGGAAACGGGAAACGTG 33491 |||| ||| || |||||||| ||| |||||| || || | || || || || ||| Sbjct 1010 GTGACGCAGGAAGCTATCATCGAGAAGTTGGAACACTATCGCAGAGAGACAGGCAATGTG 1069 Query 33492 ATAGGTAAGGGTGTGAACAGGGATGCAGCTGAGATAGTCAGGAAGGGTAGTAAAGCTGTG 33551 || || ||||| || ||||||||||| || |||||||| ||| | ||||| |||||||| Sbjct 1070 ATCGGCAAGGGAGTTAACAGGGATGCTGCGGAGATAGTGAGGGAAGGTAGCCAAGCTGTG 1129 Query 33552 AAGTAGGCACAAAAAACCCGGCGCGGTGGCCGG 33584 |||||||||||||||||||||| | ||||||| Sbjct 1130 AAGTAGGCACAAAAAACCCGGCTCAATGGCCGG 1162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147541424143872