Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq837 91.5 4e-13 seq323 86.0 2e-11 >seq837 Length=329666 Score = 91.5 bits (100), Expect = 4e-13 Identities = 153/218 (70%), Gaps = 5/218 (2%) Strand=Plus/Minus Query 155944 CATAGAAAAGGTCCCTTGC-CTTTGACTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAG 156002 ||||||| || |||| || | || |||||| | |||||||||||||| ||||| || Sbjct 86124 CATAGAAGAGATCCCGGGCGCGCTG-CTCCTCCTTGCCGTGATTCTTCCTCAGCTCCAAC 86066 Query 156003 AATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTT- 156061 || || | ||| | || |||||||| ||||| || ||| || |||||||| Sbjct 86065 AAGTCGAAGACATCTGCGTGCCAAGGCTCCAGGTACATCGCGAAAGAGCCCTTCCTCTTT 86006 Query 156062 --GCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATA 156119 ||||||||||| || ||||| || |||| |||||| | ||||| || | | Sbjct 86005 CCTCCACCCTGATCGACGTACCGCGCCGTCTCGTTGAAGTTCCGGAGCATGGGCACGAGG 85946 Query 156120 CCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACC 156157 |||||| ||||||||| || ||||| | ||| || Sbjct 85945 CCATTGCTGTGGCCATTGGTGCCACGAATGTACGACCC 85908 >seq323 Length=666680 Score = 86.0 bits (94), Expect = 2e-11 Identities = 129/183 (70%), Gaps = 3/183 (2%) Strand=Plus/Plus Query 155969 CTCCTCATCGCCGTGATTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGG 156028 |||||| | |||||| ||||| || ||||| | ||| || || || | ||| || Sbjct 306472 CTCCTCCTTGCCGTGGTTCTTGCGAAGCTCCAGGAAGTCAAAAACATTCGCATGCCAGGG 306531 Query 156029 CTCCAGATACATAGCAAAACTACCATTCCTCTT---GCCACCCTGATCTACATACCGAGC 156085 |||||| |||||||| || || |||||||| ||| |||||||| ||||||| || Sbjct 306532 CTCCAGGTACATAGCGAATGAGCCCTTCCTCTTGCCGCCGCCCTGATCCACATACCTCGC 306591 Query 156086 AGTCTTATTGAAGACACCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCG 156145 |||| ||||| || ||||| || | || |||||| ||| || || ||||| Sbjct 306592 CGTCTCGTTGAAATTACGGAGCATGGGTACGATGCCATTGCTGTGGCCGTTCGTGCCGCG 306651 Query 156146 AAT 156148 ||| Sbjct 306652 AAT 306654 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471634906960856