Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_021530.1 Length=171407 Score E Sequences producing significant alignments: (Bits) Value seq747 131 2e-25 >seq747 Length=368976 Score = 131 bits (144), Expect = 2e-25 Identities = 227/327 (69%), Gaps = 6/327 (2%) Strand=Plus/Plus Query 159858 GGTATACTAGGTGGAGCACTACTCAGTGCCATCCATGGCGTTACTGTAGAGAACACACTG 159917 || ||| |||| ||||| ||||| || |||||||| | |||||| ||||| || Sbjct 84005 GGAATATTAGGAGGAGCTCTACTATCAGCTATCCATGGTGCTACTGTCATTAACACTCTT 84064 Query 159918 TATGAAGATGGAGAACAAGCAAATAC--CTTTAAG-GCGTTTGATTCAACTCAAGAGGAG 159974 ||| |||||| | ||| |||| |||| | || || ||| ||| || Sbjct 84065 TATCAAGATGCT---CGTGCATATACTACTTTTCGTGCTTTCTCACCAAGTCAGCCAGAA 84121 Query 159975 GAGACTTACTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCGTTT 160034 || ||||| || ||| | || || || || |||||||| || || || ||| | || || Sbjct 84122 GAAACTTATTCAATGCTTACAGCTAATCGTTTCTGGTCTCAAATATTTGGTGTAGCTTTC 84181 Query 160035 TCTAACAAGCGGTGGCTTCATTTCTTCATGTTGTTTGTGCCTGTTATGGGTCTTTGGACA 160094 || || ||| | |||||||||||||||||| | ||||| ||| | ||| | ||| || Sbjct 84182 TCAAATAAGAGATGGCTTCATTTCTTCATGCTATTTGTACCTCTAGGAGGTATGTGGGCA 84241 Query 160095 TCCTCTATTGGCATTATTGGCCTTGCTCTTAATCTTCGTGCTTACGATTTCGTAAGTCAA 160154 || || ||||| || ||||| | || ||||| | | ||||| ||||| | |||| Sbjct 84242 TCTTCAATTGGTATCATTGGATTAGCATTTAATTTAAGAGCTTATGATTTTATTTCTCAA 84301 Query 160155 GAGATCAGAGCAGCAGAAGATCCAGAA 160181 || | | ||||||||||||| || || Sbjct 84302 GAATTGAAAGCAGCAGAAGATACATAA 84328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548307991860160