Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_021534.1 Length=47552 Score E Sequences producing significant alignments: (Bits) Value seq2600 102 2e-17 >seq2600 Length=11323 Score = 102 bits (112), Expect = 2e-17 Identities = 210/310 (68%), Gaps = 2/310 (1%) Strand=Plus/Plus Query 33165 TATGGCATCTCGAGGAATCAACAAAGTAATCATTTTGGGCACTCTCGGACAAGACCCGGA 33224 ||||||| || || | |||||||| |||||| | || | |||||| ||||| || || Sbjct 1442 TATGGCACAACGTGGTGTTAACAAAGTCATCATTGTCGGGAATCTCGGCCAAGATCCCGA 1501 Query 33225 AGTTAAATATATGCCTTCTGGCGGCGCTGTGTGCAATCTGTCTCTGGCAACATCAGAGCA 33284 | | |||| ||| ||| |||| |||| | || | |||||||| || Sbjct 1502 ACTCCGTGCAATGCAAAATGGTGGCTCTGTAGCCAATATTTCAATCGCAACATCTGAAAC 1561 Query 33285 GTGGAACGATAAAGCA-ACAGGGGAAAAGAAAGAGCAGACAGAATGGCATCGCGTGGTTA 33343 ||| || || ||| || || || | ||| | ||||| ||||||||||| ||| Sbjct 1562 CTGGCGTGACAA-GCAGACGGGTGAGCAACGAGAAAAAACAGAGTGGCATCGCGTTGTTT 1620 Query 33344 TCTTCGGAAAGCTGGCAGAGGTGGCTGGCGAATACCTGCGCAAAGGCTCTCAGGTGTATG 33403 |||| ||||| | || || || | ||| || ||||||| ||||||||| || | ||| Sbjct 1621 TCTTTGGAAAATTAGCCGATGTTGTTGGTGAGTACCTGCACAAAGGCTCGCAAATATATA 1680 Query 33404 TAGAAGGAAAATTACGTACTCGCAAATGGACAGATCAAAGCGGTGTTGAAAAATACACTA 33463 | |||||| || | || || || ||| ||| |||||||| || ||||| | Sbjct 1681 TCGAAGGACAACTTTCCACGCGTAAGTGGCAAGACCAAAGCGGCACGGATCGCTACACGA 1740 Query 33464 CTGAAATCGT 33473 |||| ||||| Sbjct 1741 CTGAGATCGT 1750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152027308005984