Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_021536.1 Length=171797 Score E Sequences producing significant alignments: (Bits) Value seq747 152 6e-32 >seq747 Length=368976 Score = 152 bits (168), Expect = 6e-32 Identities = 230/321 (72%), Gaps = 6/321 (2%) Strand=Plus/Plus Query 152923 GGTATTTTGGGAGGGGCCTTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATACTTTG 152982 || || || ||||| || | || || || || ||||||| ||| || || ||| | Sbjct 84005 GGAATATTAGGAGGAGCTCTACTATCAGCTATCCATGGTGCTACTGTCATTAACACTCTT 84064 Query 152983 TATCAAGATGGT-GAACAAGCAAAC-ACTTTCAAAGCTTTCGACAGCAC-TCAAGAAGAA 153039 |||||||||| | | || | || ||||| |||||| || || ||| |||| Sbjct 84065 TATCAAGATGCTCGTGCAT--ATACTACTTTTCGTGCTTTCT-CACCAAGTCAGCCAGAA 84121 Query 153040 GAGACCTATTCGATGGTTACTGCTAACCGTTTCTGGTCCCAGATATTTGGAATTGCTTTT 153099 || || ||||| ||| |||| ||||| ||||||||||| || |||||||| | ||||| Sbjct 84122 GAAACTTATTCAATGCTTACAGCTAATCGTTTCTGGTCTCAAATATTTGGTGTAGCTTTC 84181 Query 153100 AGCAATAAACGCTGGCTTCATTTCTTTATGCTGTTTGTACCTGTTATGGGTCTTTGGACC 153159 ||||| | |||||||||||||| ||||| ||||||||| | ||| | ||| | Sbjct 84182 TCAAATAAGAGATGGCTTCATTTCTTCATGCTATTTGTACCTCTAGGAGGTATGTGGGCA 84241 Query 153160 TCTTCTATTGGAATCATTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTTGTATCTCAA 153219 ||||| ||||| |||||||| | || | ||| | | ||||| |||||| | |||||| Sbjct 84242 TCTTCAATTGGTATCATTGGATTAGCATTTAATTTAAGAGCTTATGATTTTATTTCTCAA 84301 Query 153220 GAAATCAGGGCGTCAGAAGAT 153240 ||| | | || |||||||| Sbjct 84302 GAATTGAAAGCAGCAGAAGAT 84322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549555840727360