Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_023584.1 Length=170438 Score E Sequences producing significant alignments: (Bits) Value seq747 100 3e-16 seq1829 86.0 7e-12 >seq747 Length=368976 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 159453 GAGGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGCATTGCG 159512 || || |||||||| ||| | || || || || |||||||| || || || || | || Sbjct 84119 GAAGAAACTTATTCAATGCTTACAGCTAATCGTTTCTGGTCTCAAATATTTGGTGTAGCT 84178 Query 159513 TTTTCTAACAAGCGGTGGCTTCATTTCTTTATGTTGTTTGTGCCTGTTATGGGTCTATGG 159572 || || || ||| | |||||||||||||| ||| | ||||| ||| | ||| | ||| Sbjct 84179 TTCTCAAATAAGAGATGGCTTCATTTCTTCATGCTATTTGTACCTCTAGGAGGTATGTGG 84238 Query 159573 ACATCCAGTATTGGCATTATTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGT 159632 |||| ||||| || ||||| | || | ||| | | ||||| ||||| | | Sbjct 84239 GCATCTTCAATTGGTATCATTGGATTAGCATTTAATTTAAGAGCTTATGATTTTATTTCT 84298 Query 159633 CAAGAGATCAGAGCAGCAGAAGATCCAGAA 159662 ||||| | | ||||||||||||| || || Sbjct 84299 CAAGAATTGAAAGCAGCAGAAGATACATAA 84328 >seq1829 Length=69660 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 159645 GCAGCAGAAGATCCAGAATTTGAAACGTTCTACACCAAGAACATTCTTCTGAATGAAGGA 159704 |||||||||||||| ||||||||||| ||||| || ||||||||||| || |||||||| Sbjct 44152 GCAGCAGAAGATCCTGAATTTGAAACATTCTATACAAAGAACATTCTACTCAATGAAGGT 44093 Query 159705 CTACGTGCTTGGTTGGC 159721 |||| |||| |||| Sbjct 44092 ATACGACTTTGGATGGC 44076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 545207567367040