Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq747 116 4e-21 seq1829 86.0 8e-12 >seq747 Length=368976 Score = 116 bits (128), Expect = 4e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 179617 GAGGAGACCTATTCTATGGTTACAGCGAACCGTTTTTGGTCGCAGATCTTCGGGGTTCCG 179676 || || || ||||| ||| ||||||| || ||||| ||||| || || || || || | Sbjct 84119 GAAGAAACTTATTCAATGCTTACAGCTAATCGTTTCTGGTCTCAAATATTTGGTGTAGCT 84178 Query 179677 TTTAGCAATAAGCGTTGGTTCCACTTCTTTAAGCTGTTTGTTCCTGTCATGGGTCTTTGG 179736 || |||||| | ||| | || ||||| | ||| ||||| ||| | ||| | ||| Sbjct 84179 TTCTCAAATAAGAGATGGCTTCATTTCTTCATGCTATTTGTACCTCTAGGAGGTATGTGG 84238 Query 179737 GTCTCTTCTATTGGCATCATTGGGCTAGCTCTTAATCTTCGTGCTTATGATTTTGTGAGT 179796 | ||||| ||||| |||||||| |||| ||||| | | |||||||||||| | | Sbjct 84239 GCATCTTCAATTGGTATCATTGGATTAGCATTTAATTTAAGAGCTTATGATTTTATTTCT 84298 Query 179797 CAAGAGATCAGAGCAGCAGAAGAT 179820 ||||| | | ||||||||||||| Sbjct 84299 CAAGAATTGAAAGCAGCAGAAGAT 84322 >seq1829 Length=69660 Score = 86.0 bits (94), Expect = 8e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 179809 GCAGCAGAAGATCCTGAGTTCGAGACGTTCTATACAAAGAACATTCTTCTGAATGAAGGA 179868 ||||||||||||||||| || || || |||||||||||||||||||| || |||||||| Sbjct 44152 GCAGCAGAAGATCCTGAATTTGAAACATTCTATACAAAGAACATTCTACTCAATGAAGGT 44093 Query 179869 CTACGTGCTTGGTTGGC 179885 |||| |||| |||| Sbjct 44092 ATACGACTTTGGATGGC 44076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605593853702080