Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_024369.2 Length=41569 Score E Sequences producing significant alignments: (Bits) Value seq2600 111 4e-20 >seq2600 Length=11323 Score = 111 bits (122), Expect = 4e-20 Identities = 195/284 (69%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 38206 GGTGTAAACAAGGTGATCTTAATTGGTCACCTTGGTCAAGATCCAGAGGTGCGCTATCTA 38265 ||||| ||||| || ||| | | || | || || |||||||| || | || | Sbjct 1455 GGTGTTAACAAAGTCATCATTGTCGGGAATCTCGGCCAAGATCCCGAACTCCGTGCAATG 1514 Query 38266 CCAAGCGGCGGCGCAGTGGCAAACATCACAATAGCAACGTCTGAGGTTTGGCGGGATAAG 38325 | || || ||| | || || || || |||| ||||| ||||| ||||| || ||| Sbjct 1515 CAAAATGGTGGCTCTGTAGCCAATATTTCAATCGCAACATCTGAAACCTGGCGTGACAAG 1574 Query 38326 CAAACCGGACAGCCAAAAGAGAAAACAGAGTGGCACCGAGTTACTTTGTTTGGGAAGCTG 38385 || || || ||| | ||| |||||||||||||| || ||| ||| ||||| || | Sbjct 1575 CAGACGGGTGAGCAACGAGAAAAAACAGAGTGGCATCGCGTTGTTTTCTTTGGAAAATTA 1634 Query 38386 GCTGAAGTTGCTGGCGAATACCTTCGAAAAGGATCTCATGTTTATATTGAAGGCCAGCTT 38445 || || |||| ||| || ||||| | ||||| || || | ||||| ||||| || ||| Sbjct 1635 GCCGATGTTGTTGGTGAGTACCTGCACAAAGGCTCGCAAATATATATCGAAGGACAACTT 1694 Query 38446 GAAACTAAGAAGTGGCGGGATCAAAGCGGTCAGGACCGATACAC 38489 || ||||||| || |||||||| ||| || ||||| Sbjct 1695 TCCACGCGTAAGTGGCAAGACCAAAGCGGCACGGATCGCTACAC 1738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132883910611536