Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_025430.1 Length=42351 Score E Sequences producing significant alignments: (Bits) Value seq2600 102 2e-17 >seq2600 Length=11323 Score = 102 bits (112), Expect = 2e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 230 ACCACGATTTCAGTTGTGTAGCGATCAACGCCAGCCTGGTCCTGCCACTTGCGCGTTTGC 289 || ||||| ||||| ||||||||||| ||| ||||| |||||||| ||||| Sbjct 1753 ACTACGATCTCAGTCGTGTAGCGATCCGTGCCGCTTTGGTCTTGCCACTTACGCGTGGAA 1694 Query 290 AGCGCGCCTTCAATGAACACCTTGCT-GCCTTTGCGCAGGTACTGGCTGGCGATTTCTGC 348 || ||||| || | | |||| ||||||| ||||||||| | | | || || Sbjct 1693 AGTTGTCCTTCGATATATAT-TTGCGAGCCTTTGTGCAGGTACTCACCAACAACATCGGC 1635 Query 349 CAGCTTTCCGAAGATGACCACGCGGTGCCATTCCGTTTTTTCTTTCTTCTCCCCTGTCTG 408 | ||||| |||| || ||||| ||||| || ||||||||| | ||| || ||||| Sbjct 1634 TAATTTTCCAAAGAAAACAACGCGATGCCACTCTGTTTTTTCTCGTTGCTCACCCGTCTG 1575 Query 409 CTTATCCTTCCAGGTTTCAGACGTGGCAATTGA 441 ||| || |||||||||||| || || ||||| Sbjct 1574 CTTGTCACGCCAGGTTTCAGATGTTGCGATTGA 1542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135386022722928