Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_026923.1 Length=179110 Score E Sequences producing significant alignments: (Bits) Value seq747 122 1e-22 >seq747 Length=368976 Score = 122 bits (134), Expect = 1e-22 Identities = 221/320 (69%), Gaps = 4/320 (1%) Strand=Plus/Plus Query 159943 GGTATACTAGGTGGAGCACTGTTGTGTGCAATCCATGGTGCTACTGTAGAGAACACATTG 160002 || ||| |||| ||||| || | | || ||||||||||||||||| ||||| | Sbjct 84005 GGAATATTAGGAGGAGCTCTACTATCAGCTATCCATGGTGCTACTGTCATTAACACTCTT 84064 Query 160003 TTTGAAGATGGA-GAACAAGCAAAC-ACATTTAAGGCGTTTGAGCCTACTCAAGAAGAAG 160060 | | |||||| | || | || || ||| || || || | ||| ||||| Sbjct 84065 TATCAAGATGCTCGTGCAT--ATACTACTTTTCGTGCTTTCTCACCAAGTCAGCCAGAAG 84122 Query 160061 AGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTGTTGCATTTT 160120 | |||||||| ||| | || || || || |||||||| || || || ||||| || || | Sbjct 84123 AAACTTATTCAATGCTTACAGCTAATCGTTTCTGGTCTCAAATATTTGGTGTAGCTTTCT 84182 Query 160121 CTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACAT 160180 | || ||| | ||||||||||| |||||| | ||||| ||| | ||| | ||| ||| Sbjct 84183 CAAATAAGAGATGGCTTCATTTCTTCATGCTATTTGTACCTCTAGGAGGTATGTGGGCAT 84242 Query 160181 CCTCTATTGGCATTATTGGTCTTGCTTTCAACCTTCGTGCTTACGATTTCGTGAGTCAGG 160240 | || ||||| || ||||| | || || || | | ||||| ||||| | ||| | Sbjct 84243 CTTCAATTGGTATCATTGGATTAGCATTTAATTTAAGAGCTTATGATTTTATTTCTCAAG 84302 Query 160241 AGATTAGAGCAGCAGAAGAT 160260 | | | ||||||||||||| Sbjct 84303 AATTGAAAGCAGCAGAAGAT 84322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 572954606793600