Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_026924.1 Length=174885 Score E Sequences producing significant alignments: (Bits) Value seq747 107 2e-18 seq1829 86.0 7e-12 >seq747 Length=368976 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 162366 GAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCG 162425 ||||| |||||||| ||| | || || || || |||||||| || || || ||| | || Sbjct 84119 GAAGAAACTTATTCAATGCTTACAGCTAATCGTTTCTGGTCTCAAATATTTGGTGTAGCT 84178 Query 162426 TTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGG 162485 || || || ||| | ||||||||||| |||||| | ||||| ||| | ||| | ||| Sbjct 84179 TTCTCAAATAAGAGATGGCTTCATTTCTTCATGCTATTTGTACCTCTAGGAGGTATGTGG 84238 Query 162486 ACATCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGT 162545 |||| || ||||| || ||||| | || | || | | ||||| ||||| | | Sbjct 84239 GCATCTTCAATTGGTATCATTGGATTAGCATTTAATTTAAGAGCTTATGATTTTATTTCT 84298 Query 162546 CAGGAGATCAGAGCAGCAGAAGAT 162569 || || | | ||||||||||||| Sbjct 84299 CAAGAATTGAAAGCAGCAGAAGAT 84322 >seq1829 Length=69660 Score = 86.0 bits (94), Expect = 7e-12 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 162558 GCAGCAGAAGATCCTGAGTTTGAAACGTTCTACACTAAGAACATTCTGCTCAATGAAGGA 162617 ||||||||||||||||| |||||||| ||||| || ||||||||||| ||||||||||| Sbjct 44152 GCAGCAGAAGATCCTGAATTTGAAACATTCTATACAAAGAACATTCTACTCAATGAAGGT 44093 Query 162618 CTACG 162622 |||| Sbjct 44092 ATACG 44088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559436244065600