Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq747 127 3e-24 >seq747 Length=368976 Score = 127 bits (140), Expect = 3e-24 Identities = 221/319 (69%), Gaps = 2/319 (1%) Strand=Plus/Plus Query 176415 GGTATACTAGGTGGAGCACTACTATCTGCAATCCATGGCGTTACTGTTGAAAATACCCTA 176474 || ||| |||| ||||| |||||||| || |||||||| | |||||| || || || Sbjct 84005 GGAATATTAGGAGGAGCTCTACTATCAGCTATCCATGGTGCTACTGTCATTAACACTCTT 84064 Query 176475 TATGAAGATGGA-GAACAGAACAACACCTTCACTGCGTTCGATTCCACGCAGGAGGAAGA 176533 ||| |||||| | || | | || || ||| ||| | | ||| ||||| Sbjct 84065 TATCAAGATGCTCGTGCATAT-ACTACTTTTCGTGCTTTCTCACCAAGTCAGCCAGAAGA 84123 Query 176534 GACCTATTCGATGGTTACTGCGAACCGCTTCTGGTCGCAAATCTTCGGGGTTGCGTTTAG 176593 || ||||| ||| |||| || || || |||||||| ||||| || || || || || Sbjct 84124 AACTTATTCAATGCTTACAGCTAATCGTTTCTGGTCTCAAATATTTGGTGTAGCTTTCTC 84183 Query 176594 TAATAAGCGTTGGCTTCACTTCTTTATGTTGTTTGTCCCTGTCATGGGTCTTTGGGTCTC 176653 |||||| | |||||||| ||||| ||| | ||||| ||| | ||| | |||| || Sbjct 84184 AAATAAGAGATGGCTTCATTTCTTCATGCTATTTGTACCTCTAGGAGGTATGTGGGCATC 84243 Query 176654 AAGTATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGATTTTGTGAGCCAAGA 176713 ||||| |||||||| | || ||||| | | |||||||||||| | ||||| Sbjct 84244 TTCAATTGGTATCATTGGATTAGCATTTAATTTAAGAGCTTATGATTTTATTTCTCAAGA 84303 Query 176714 GATTAGAGCAGCAGAAGAT 176732 | | ||||||||||||| Sbjct 84304 ATTGAAAGCAGCAGAAGAT 84322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729841205525440