Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_026928.1 Length=189418 Score E Sequences producing significant alignments: (Bits) Value seq747 116 4e-21 >seq747 Length=368976 Score = 116 bits (128), Expect = 4e-21 Identities = 220/321 (69%), Gaps = 6/321 (2%) Strand=Plus/Plus Query 179787 GGTATACTAGGAGGAGCACTGCTCAGTGCTATCCATGGAGTTACTGTAGAGAATACATTG 179846 || ||| |||||||||| || || ||||||||||| | |||||| || || | Sbjct 84005 GGAATATTAGGAGGAGCTCTACTATCAGCTATCCATGGTGCTACTGTCATTAACACTCTT 84064 Query 179847 TATGAAGATGGAGAACAAGCAAATAC--CTTTAAG-GCGTTTGATTCGACACAGGAAGAA 179903 ||| |||||| | ||| |||| |||| | || || | | ||| |||| Sbjct 84065 TATCAAGATGCT---CGTGCATATACTACTTTTCGTGCTTTCTCACCAAGTCAGCCAGAA 84121 Query 179904 GAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTT 179963 || |||||||| ||| | || || || || |||||||| || || || ||| | || || Sbjct 84122 GAAACTTATTCAATGCTTACAGCTAATCGTTTCTGGTCTCAAATATTTGGTGTAGCTTTC 84181 Query 179964 TCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACA 180023 || || ||| | ||||||||||| |||||| | ||||| ||| | ||| | ||| || Sbjct 84182 TCAAATAAGAGATGGCTTCATTTCTTCATGCTATTTGTACCTCTAGGAGGTATGTGGGCA 84241 Query 180024 TCCTCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTAAGTCAG 180083 || || ||||| || ||||| | || | || | | ||||| ||||| | ||| Sbjct 84242 TCTTCAATTGGTATCATTGGATTAGCATTTAATTTAAGAGCTTATGATTTTATTTCTCAA 84301 Query 180084 GAGATCAGAGCAGCAGAAGAT 180104 || | | ||||||||||||| Sbjct 84302 GAATTGAAAGCAGCAGAAGAT 84322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605936212237440