Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_027130.1 Length=172688 Score E Sequences producing significant alignments: (Bits) Value seq747 122 1e-22 >seq747 Length=368976 Score = 122 bits (134), Expect = 1e-22 Identities = 225/327 (69%), Gaps = 6/327 (2%) Strand=Plus/Plus Query 160463 GGTATACTAGGAGGAGCACTGCTCAGTGCCATCCATGGCGTTACTGTAGAGAACACACTG 160522 || ||| |||||||||| || || || |||||||| | |||||| ||||| || Sbjct 84005 GGAATATTAGGAGGAGCTCTACTATCAGCTATCCATGGTGCTACTGTCATTAACACTCTT 84064 Query 160523 TATGAAGATGGAGAACAAGCAAATAC--CTTTAAG-GCGTTTGATTCGACACAGGAAGAA 160579 ||| |||||| | ||| |||| |||| | || || | | ||| |||| Sbjct 84065 TATCAAGATGCT---CGTGCATATACTACTTTTCGTGCTTTCTCACCAAGTCAGCCAGAA 84121 Query 160580 GAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCGTTT 160639 || |||||||| ||| | || || || || |||||||| || || || ||| | || || Sbjct 84122 GAAACTTATTCAATGCTTACAGCTAATCGTTTCTGGTCTCAAATATTTGGTGTAGCTTTC 84181 Query 160640 TCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTTTGGACA 160699 || || ||| | ||||||||||| |||||| | ||||| ||| | ||| | ||| || Sbjct 84182 TCAAATAAGAGATGGCTTCATTTCTTCATGCTATTTGTACCTCTAGGAGGTATGTGGGCA 84241 Query 160700 TCCAGTATTGGCATTATTGGTCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAA 160759 || ||||| || ||||| | || | ||| | | ||||| ||||| | |||| Sbjct 84242 TCTTCAATTGGTATCATTGGATTAGCATTTAATTTAAGAGCTTATGATTTTATTTCTCAA 84301 Query 160760 GAGATTAGAGCAGCAGAAGATCCAGAA 160786 || | | ||||||||||||| || || Sbjct 84302 GAATTGAAAGCAGCAGAAGATACATAA 84328 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552406695447040