Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_027995.1 Length=41666 Score E Sequences producing significant alignments: (Bits) Value seq2600 96.9 9e-16 >seq2600 Length=11323 Score = 96.9 bits (106), Expect = 9e-16 Identities = 201/293 (69%), Gaps = 10/293 (3%) Strand=Plus/Plus Query 41172 AACAAAGTAGAAATCATTGGC---AACTTAGGCAACGATCCAGAAATCCGTTACATGCCA 41228 |||||||| ||||||| | || | ||| | ||||| ||| ||||| |||| | Sbjct 1461 AACAAAGTC---ATCATTGTCGGGAATCTCGGCCAAGATCCCGAACTCCGTGCAATGCAA 1517 Query 41229 AGCGGCGGCGCGGTTGCTAATCTAAGCATCGCCACAACTGAAAGCTGGAAGGATAAAACC 41288 | || ||| | || || ||| | ||||| ||| |||||| |||| || || Sbjct 1518 AATGGTGGCTCTGTAGCCAATATTTCAATCGCAACATCTGAAACCTGGCGTGACAAGCAG 1577 Query 41289 ACCGGCGAGAAGAAAGAACAAACGGAATGGCACCGCGTTGTCATCTTCGGTAAGCTGGCA 41348 || || ||| | |||| |||| || ||||| |||||||| |||| || || | || Sbjct 1578 ACGGGTGAGCAACGAGAAAAAACAGAGTGGCATCGCGTTGTTTTCTTTGGAAAATTAGCC 1637 Query 41349 GAAATTGCTAGCGAATACCTGCGCAAAGG-TAGCAAGGTGTTCATTGAAGG-CAGCCTGC 41406 || ||| | | || ||||||| |||||| | |||| | | || ||||| || | | | Sbjct 1638 GATGTTGTTGGTGAGTACCTGCACAAAGGCTCGCAAA-TATATATCGAAGGACAACTTTC 1696 Query 41407 GAACGCGTAAATGGCAGGACCAGGCTGGCGTTGATCGCTACACCACTGAAATC 41459 | ||||||| ||||| ||||| ||| ||||||||||| ||||| ||| Sbjct 1697 CA-CGCGTAAGTGGCAAGACCAAAGCGGCACGGATCGCTACACGACTGAGATC 1748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133194274901568