Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq342 84.2 7e-11 >seq342 Length=642287 Score = 84.2 bits (92), Expect = 7e-11 Identities = 101/136 (74%), Gaps = 1/136 (1%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| || || || || || || || || || ||||| || | || ||||| || || | Sbjct 493852 CAAG-TGCAGGGTGGATTCCTTCTGGATGTTGTAATCCGAAAGGGTACGCCCGTCCTCCA 493910 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || ||||| || || || || ||||| || || || || ||||| |||||||||| Sbjct 493911 GCTGCTTGCCAGCGAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCTTCCTTATCCTGAA 493970 Query 140650 TTTTAGCTTTTACATT 140665 | |||||||| || || Sbjct 493971 TCTTAGCTTTGACCTT 493986 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515066315259464