Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq662 102 5e-17 >seq662 Length=408752 Score = 102 bits (112), Expect = 5e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| |||| | ||||| |||||| || || ||| ||||| || ||||||||||| || Sbjct 149022 GCCACCTCGCAAACGCAGCACCAAGTGAAGGGTGGATTCCTTCTGGATGTTATAATCGGA 148963 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 |||||| | |||| || | || || || || || || || ||||| |||||||| || Sbjct 148962 AAGTGTCCTTCCGTCCTCCAACTGCTTGCCAGCGAAGATCAAGCGCTGCTGGTCCGGAGG 148903 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCA 34657 | || |||||||| |||| || | || || || || ||||| | ||| | Sbjct 148902 GATGCCTTCCTTGTCCTGGATC-TTAGCCTTGACATTATCGATGGTGTCGCTGGCCTCAA 148844 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | |||| || ||||| || || || | || ||||| || ||||||||| Sbjct 148843 CATCCAACGTAATCGTCTTGCCCGTCAGGGTCTTCACGAAGATCTGCATG 148794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314692439089304