Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq747 150 2e-31 seq1829 91.5 2e-13 seq596 82.4 1e-10 >seq747 Length=368976 Score = 150 bits (166), Expect = 2e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 191495 GAGGAAACTTATTCTATGATCACTGCAAACAGATTCTGGTCACAGATATTTGGTATTGCA 191554 || ||||||||||| ||| | || || || | |||||||| || ||||||||| | || Sbjct 84119 GAAGAAACTTATTCAATGCTTACAGCTAATCGTTTCTGGTCTCAAATATTTGGTGTAGCT 84178 Query 191555 TTCTCTAACAAAAGATTTCTACACTTCTTGATGTTGTTTGTTCCTGTAATGGGAATGTGG 191614 ||||| || || |||| || || ||||| ||| | ||||| ||| || || |||||| Sbjct 84179 TTCTCAAATAAGAGATGGCTTCATTTCTTCATGCTATTTGTACCTCTAGGAGGTATGTGG 84238 Query 191615 ACATCATCAATAGGTATTGTAGGTCTTGCACTTAACTTAAGAGCATATGATTTTGTATCT 191674 |||| ||||| ||||| | || | ||| |||| |||||||| ||||||||| | ||| Sbjct 84239 GCATCTTCAATTGGTATCATTGGATTAGCATTTAATTTAAGAGCTTATGATTTTATTTCT 84298 Query 191675 CAAGAGATAAGAGCAGCAGAAGA 191697 ||||| | | |||||||||||| Sbjct 84299 CAAGAATTGAAAGCAGCAGAAGA 84321 >seq1829 Length=69660 Score = 91.5 bits (100), Expect = 2e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 191687 GCAGCAGAAGACCCAGAGTTTGAAACCTTCTATACTAAGAACATTCTTCTTAATGAAGGT 191746 ||||||||||| || || |||||||| |||||||| ||||||||||| || ||||||||| Sbjct 44152 GCAGCAGAAGATCCTGAATTTGAAACATTCTATACAAAGAACATTCTACTCAATGAAGGT 44093 Query 191747 ATGAGAGCATGGATGTCTTCAGTAGACCAACCTCATGA 191784 || || |||||| || | ||| ||| ||||||| Sbjct 44092 ATACGACTTTGGATGGCTGTACAAGATCAAGCTCATGA 44055 >seq596 Length=448761 Score = 82.4 bits (90), Expect = 1e-10 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 191084 TGGAACTTTGTAGCACTTCATGGTGTATTTGGTCTCATAGGATTCATGTTACGTCAGTTT 191143 |||| ||| | || ||||||| | |||||||||||| |||| ||||||||||| Sbjct 52685 TGGACATTTATTGCTTTTCATGGGCTCATTGGTCTCATAGCATTCTCCCTACGTCAGTTT 52744 Query 191144 GAAATTGCAGGATTGGTGGGTATTAGACCTTACAATGCTCTTGCTTTTTCTGCTGTCATA 191203 ||||| ||| |||| || |||||||| || ||||| ||||| || || | ||| Sbjct 52745 GAAATAGCACGATTAGTTTTAATTAGACCCTATAATGCACTTGCATTCTCAGGACCAATA 52804 Query 191204 GCAGTTTTCACAAGTGTATT 191223 ||||||| ||| ||| || Sbjct 52805 GCAGTTTATACATCTGTNTT 52824 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631350734166080