Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_029003.2 Length=29733 Score E Sequences producing significant alignments: (Bits) Value seq4617 140 6e-29 >seq4617 Length=2647 Score = 140 bits (154), Expect = 6e-29 Identities = 160/215 (74%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 13122 CGCAGATGGTAATGCGGAAACCACGGTTAGAAACATTGCATTTAACTACATAGTGAGGCT 13181 ||||| ||||||||| || | ||| |||| |||||| || ||||| ||||| ||||| || Sbjct 1659 CGCAGCTGGTAATGCTGAGAACACCGTTAAAAACATCGCCTTTAATTACATTGTGAGACT 1600 Query 13182 GGCATAATGACTTTTAAAATGAGCAGCAAAGCGCAGACAATTAAAATTTTCAATCTGCGT 13241 ||||||||||||||||| | |||| | |||||| ||||| || ||||| Sbjct 1599 TGCATAATGACTTTTAAATTTTCTGATAAAGACCGAACAATTCGAATTTATAACCTGCGA 1540 Query 13242 TCAGATACTAACGAATTTATTGGTGCGGGCGATGCGTATATCCCGCCGCACACTGGATTA 13301 ||||||| |||||||| |||||||| ||||| ||||| ||| | || |||||| Sbjct 1539 GCAGATACCCGTGAATTTATCGGTGCGGGTGATGCTTATATTCCGGCCGGGACGGGATTA 1480 Query 13302 CCGGCTAATTGTACTGATGTCGCCCCTCCTGAAAT 13336 || ||| | || || ||| | || || ||||| || Sbjct 1479 CCAGCTGACTGCACAGATATTGCGCCGCCTGATAT 1445 Score = 118 bits (130), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 12624 CCTGATG--TCGTGTCCGCCCGGTGTTCCCCTTCCGTGGCCGTCTGACACTATCCCTGCC 12681 ||||||| |||| ||| |||| || |||| |||||||| ||||| || | Sbjct 2321 CCTGATGATTCGTTTCCTGTTGGTGCCCCTATTCCATGGCCGTCCGACACAGCGCCATAC 2262 Query 12682 GGTTATGCCCTGATGCAGGGGCAGGTATTTGATAAGAACGTTTATCCCTTACTGGCAATA 12741 || ||||| | ||| ||| || | |||||||| | | |||||| | || || Sbjct 2261 GGATATGCAATTATGGCGGGACAAGCCTTTGATAAAACTGCTTATCCACTCCTTGCGGCG 2202 Query 12742 GCATATCCATCCGGCACTATTCCGGACATGCGAGGCTGGACAATCAAAGGTAAGCCTGTC 12801 || ||||| || |||| ||||| || ||||| |||||||| || || ||||| |||| | Sbjct 2201 GCCTATCCTTCAGGCATCATTCCCGATATGCGGGGCTGGACGATTAAGGGTAAACCTGCC 2142 Query 12802 AGTGGACGTGCGGTGCTGTCGCAAGAACTGGACGGTAACAAATCGCA 12848 || ||| | ||||||||||| || || | |||||||| |||||||| Sbjct 2141 AGCGGAAGGGCGGTGCTGTCACAGGAGCAGGACGGTATTAAATCGCA 2095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 95013067963920