Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_029015.2 Length=33509 Score E Sequences producing significant alignments: (Bits) Value seq4617 109 1e-19 >seq4617 Length=2647 Score = 109 bits (120), Expect = 1e-19 Identities = 185/268 (69%), Gaps = 0/268 (0%) Strand=Plus/Minus Query 13017 TTCCGTGGCCGTCTGACACCATCCCTGCCGGTTACGCCCTGATGCAGGGGCAAACATTTG 13076 |||| |||||||| ||||| || ||| || || | ||| ||| ||| | |||| Sbjct 2290 TTCCATGGCCGTCCGACACAGCGCCATACGGATATGCAATTATGGCGGGACAAGCCTTTG 2231 Query 13077 ATAAATCTGCTTACCCGTTACTGGCTATAGCATATCCGTCCGGCGTTATTCCGGATCTGC 13136 ||||| ||||||| || | || || || ||||| || ||| | ||||| ||| ||| Sbjct 2230 ATAAAACTGCTTATCCACTCCTTGCGGCGGCCTATCCTTCAGGCATCATTCCCGATATGC 2171 Query 13137 GAGGCTGGATAATCAAAGGCAAGCCCGCGAGCGGGCGCGCTGTGCTCTCTCAGGAGCTGG 13196 | ||||||| || || || || || || ||||| | || ||||| || ||||||| || Sbjct 2170 GGGGCTGGACGATTAAGGGTAAACCTGCCAGCGGAAGGGCGGTGCTGTCACAGGAGCAGG 2111 Query 13197 ATGGCAACAAATCGCACAGTCACAGCGCCAGAGCGCAGGATACCGATCTGGGAACGAAAG 13256 | || | |||||||| | || | || || |||||||||||| |||||| Sbjct 2110 ACGGTATTAAATCGCATACCCATGGTGCTTCTGCTTCCTCTACCGATCTGGGTACGAAAA 2051 Query 13257 GTACGTCGTCATTTGATTACGGAACGAA 13284 ||| | ||||| ||||| ||||| Sbjct 2050 ATACCAGCGCTTTTGACTACGGTACGAA 2023 Score = 107 bits (118), Expect = 4e-19 Identities = 166/233 (71%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 14362 AATGACGTTTAAAATGAGTGAGCAGGCACAGACAATTAAAATTTATAATCTGCGTTCAGA 14421 |||||| |||||| | ||| | | | |||||| ||||||||| ||||| |||| Sbjct 1594 AATGACTTTTAAATTTTCTGATAAAGACCGAACAATTCGAATTTATAACCTGCGAGCAGA 1535 Query 14422 TACGAATGAATTTATTGGGGCAGGTGATGCGTATATACCGCCACACACGGGATTACCGGC 14481 ||| ||||||||| || || |||||||| ||||| ||| | ||||||||||| || Sbjct 1534 TACCCGTGAATTTATCGGTGCGGGTGATGCTTATATTCCGGCCGGGACGGGATTACCAGC 1475 Query 14482 AAACTGTACGGATATTGCACCCCCTGATATTCCCGCCAGTCAT-ATTGCGGTATTTGACG 14540 |||| || |||||||| || ||||||| || | || | || ||| |||||| ||| Sbjct 1474 TGACTGCACAGATATTGCGCCGCCTGATA-TCGCACCGGGTATGGCTGCTGTATTTAACG 1416 Query 14541 CTGAAACCGAAACGTGGAGTCTGCATGAGGACCACCGTGGCGAGACGGTTTAC 14593 ||| ||| ||| || |||||||||| ||| || ||||| ||| Sbjct 1415 --GAA----AAAAATGGTCGCTTTATGAGGACCATCGTAATGATACGGTATAC 1369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107094877852176