Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq342 82.4 5e-11 >seq342 Length=642287 Score = 82.4 bits (90), Expect = 5e-11 Identities = 159/230 (69%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || || ||| | ||||| || |||||||| | || ||||| ||| Sbjct 493602 ATGCAGATCTTTGTCAAGACCTTGACGGGCAAGACGATCACCTTGGATGTTGAGGCCAGT 493543 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || | | ||||| ||||| | ||||| || || Sbjct 493542 GACACGATCGACAATGTCAAGGCTAAGA-TCCAGGACAAGGAAGGCATCCCGCCCGACCA 493484 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCAC--TTTAGGCGATTAC 23787 ||||| | || || || ||||| || || || |||| || || ||| || ||||| Sbjct 493483 GCAGCGCCTGATCTTCGCTGGCAAGCAGCTAGAGGACGGGCGTACCCTTTCGG--ATTAC 493426 Query 23788 AACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||||| || || || ||||| | || || || | | |||||||| || Sbjct 493425 AACATCCAGAAGGAATCCACCCTGCACTTGGTGCTGCGCTTGCGAGGCGG 493376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337969690361504