Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_031085.1 Length=166634 Score E Sequences producing significant alignments: (Bits) Value seq4617 95.1 1e-14 >seq4617 Length=2647 Score = 95.1 bits (104), Expect = 1e-14 Identities = 180/262 (69%), Gaps = 5/262 (2%) Strand=Plus/Minus Query 157398 TCCTATTGGAGCTCCTATTCCATGGCCAACGGATACTCCTCCTGACGGTTACGCTATTAT 157457 |||| |||| || |||||||||||||| | || || | || |||| || || ||||| Sbjct 2307 TCCTGTTGGTGCCCCTATTCCATGGCCGTCCGACACAGCGCCATACGGATATGCAATTAT 2248 Query 157458 GGAAGGCCAGACTTTTGATAAGTCTGCATACCCAAAATTGGCTATGGCTTACCCATCTGG 157517 || || || | |||||||| |||| || ||| | || ||| || || || || Sbjct 2247 GGCGGGACAAGCCTTTGATAAAACTGCTTATCCACTCCTTGCGGCGGCCTATCCTTCAGG 2188 Query 157518 CGTAATTCCAGATATGCGCGGGCAAACTATTAAAGGTAAAC---CAAGTGGTCGAGCTGT 157574 | | ||||| |||||||| || || ||||| ||||||| | || || | || || Sbjct 2187 CATCATTCCCGATATGCGGGGCTGGACGATTAAGGGTAAACCTGCCAGCGGAAGGGCGGT 2128 Query 157575 ATTAAGCGCAGAAGC-CGATGGTGTTAAGGCTCATAGCCATAGTGCATCGGCTTCAAGTA 157633 | | ||| ||| || ||| |||| | |||| |||| |||| || ||||| || Sbjct 2127 GCT-GTCACAGGAGCAGGACGGTATTAAATCGCATACCCATGGTGCTTCTGCTTCCTCTA 2069 Query 157634 CTGACTTGGGTACTAAAACTAC 157655 | || ||||||| |||| ||| Sbjct 2068 CCGATCTGGGTACGAAAAATAC 2047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533036241493120