Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Symbiodinium_20microadriaticum_20[genbank_20GCA_5F001939145.1_202017 -01-06] 9,688 sequences; 808,226,712 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq2600 120 2e-22 >seq2600 Length=11323 Score = 120 bits (132), Expect = 2e-22 Identities = 238/349 (68%), Gaps = 10/349 (3%) Strand=Plus/Minus Query 44709 CCGATCATTTGCATGGTGCCGCC------CTGGCTGACGATAATTTCCGTCGTGTAACGT 44762 |||| ||||||||| ||||| || | | |||| | || || |||||||| || Sbjct 1789 CCGAGCATTTGCATAGTGCCACCAGAAGCCGGATTGACTACGATCTCAGTCGTGTAGCGA 1730 Query 44763 TCTACACCGGCGTCATCTGTCCACTTACGGGTTTTAAGTTTCCCTTCGATGTAGACCTGA 44822 || ||| | ||| ||||||||| || ||||| |||||||| || | || Sbjct 1729 TCCGTGCCGCTTTGGTCTTGCCACTTACGCGTGGAAAGTTGTCCTTCGATATATATTTGC 1670 Query 44823 GAACCTTTTCGTAAATACTCACTCGCAATTTCAGCAAGTTTTCCGAACAAAACGACTTTA 44882 || ||||| | | ||||||| ||| || || | |||||| || ||||| || | Sbjct 1669 GAGCCTTTGTGCAGGTACTCACCAACAACATCGGCTAATTTTCCAAAGAAAACAACGCGA 1610 Query 44883 TGCCATTCTGTTTGCTCTTTCTGTTGGCCCGTTTGCTTGTCGCGCCATGATTCATTCGTT 44942 ||||| ||||||| ||| || | ||||| |||||||| ||||| | |||| ||| Sbjct 1609 TGCCACTCTGTTTTTTCTCGTTGCTCACCCGTCTGCTTGTCACGCCAGGTTTCAGATGTT 1550 Query 44943 GCGATGCTGAG-TCTTC-CGACCGCTCCGCCATTTGGTATATACCTGATCTCCGGGTCTT 45000 ||||| ||| | || | || | || |||||| | || | || || || |||| Sbjct 1549 GCGAT--TGAAATATTGGCTACAGAGCCACCATTTTGCATTGCACGGAGTTCGGGATCTT 1492 Query 45001 GCCCCAGGGTACCAATCAGGATGACTTTGTTTACACCGCGTTGTGCCAT 45049 | || || | || | | |||||||||||| ||||| ||||||||||| Sbjct 1491 GGCCGAGATTCCCGACAATGATGACTTTGTTAACACCACGTTGTGCCAT 1443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330860129904208